Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 NDUFV2P1-201ENST00000596415 907 ntBASIC14.29□□□□□ -0.12
WNT3AP56704 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
WNT3AP56704 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
WNT3AP56704 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
WNT3AP56704 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC14.29□□□□□ -0.12
WNT3AP56704 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
WNT3AP56704 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
WNT3AP56704 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
WNT3AP56704 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
WNT3AP56704 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
WNT3AP56704 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
WNT3AP56704 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
WNT3AP56704 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
WNT3AP56704 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
WNT3AP56704 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC14.29□□□□□ -0.12
WNT3AP56704 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
WNT3AP56704 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC14.29□□□□□ -0.12
WNT3AP56704 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC14.29□□□□□ -0.12
WNT3AP56704 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
WNT3AP56704 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC14.29□□□□□ -0.12
WNT3AP56704 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
WNT3AP56704 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC14.29□□□□□ -0.12
WNT3AP56704 AL031595.1-201ENST00000623969 4709 ntBASIC14.29□□□□□ -0.12
WNT3AP56704 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
WNT3AP56704 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
WNT3AP56704 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC14.28□□□□□ -0.12
WNT3AP56704 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC14.28□□□□□ -0.12
WNT3AP56704 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
WNT3AP56704 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC14.28□□□□□ -0.12
WNT3AP56704 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
WNT3AP56704 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
WNT3AP56704 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC14.28□□□□□ -0.12
WNT3AP56704 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
WNT3AP56704 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
WNT3AP56704 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
WNT3AP56704 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
WNT3AP56704 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC14.28□□□□□ -0.12
WNT3AP56704 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
WNT3AP56704 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
WNT3AP56704 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
WNT3AP56704 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
WNT3AP56704 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
WNT3AP56704 KRT17P5-201ENST00000332088 839 ntBASIC14.28□□□□□ -0.12
WNT3AP56704 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
WNT3AP56704 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
WNT3AP56704 MBP-201ENST00000354542 575 ntTSL 2 BASIC14.28□□□□□ -0.12
WNT3AP56704 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
WNT3AP56704 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
WNT3AP56704 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC14.28□□□□□ -0.12
WNT3AP56704 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
WNT3AP56704 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
WNT3AP56704 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
WNT3AP56704 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
WNT3AP56704 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
WNT3AP56704 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
WNT3AP56704 CYP46A4P-201ENST00000414953 267 ntBASIC14.28□□□□□ -0.12
WNT3AP56704 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC14.28□□□□□ -0.12
WNT3AP56704 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC14.28□□□□□ -0.12
WNT3AP56704 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
WNT3AP56704 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
WNT3AP56704 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
WNT3AP56704 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC14.28□□□□□ -0.12
WNT3AP56704 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC14.28□□□□□ -0.12
WNT3AP56704 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
WNT3AP56704 SPTLC1P5-201ENST00000450718 252 ntBASIC14.28□□□□□ -0.12
WNT3AP56704 AC008620.2-201ENST00000510294 1569 ntBASIC14.28□□□□□ -0.12
WNT3AP56704 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
WNT3AP56704 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC14.28□□□□□ -0.12
WNT3AP56704 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC14.28□□□□□ -0.12
WNT3AP56704 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC14.28□□□□□ -0.12
WNT3AP56704 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC14.28□□□□□ -0.12
WNT3AP56704 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC14.28□□□□□ -0.12
WNT3AP56704 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC14.28□□□□□ -0.12
WNT3AP56704 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
WNT3AP56704 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
WNT3AP56704 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC14.28□□□□□ -0.12
WNT3AP56704 AC020907.1-201ENST00000616460 1350 ntBASIC14.28□□□□□ -0.12
WNT3AP56704 MIR6799-201ENST00000620297 69 ntBASIC14.28□□□□□ -0.12
WNT3AP56704 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC14.28□□□□□ -0.12
WNT3AP56704 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC14.28□□□□□ -0.12
WNT3AP56704 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
WNT3AP56704 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
WNT3AP56704 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
WNT3AP56704 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
WNT3AP56704 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
WNT3AP56704 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
WNT3AP56704 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
WNT3AP56704 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
WNT3AP56704 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC14.27□□□□□ -0.12
WNT3AP56704 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC14.27□□□□□ -0.12
WNT3AP56704 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
WNT3AP56704 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
WNT3AP56704 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
WNT3AP56704 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
WNT3AP56704 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
WNT3AP56704 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
WNT3AP56704 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC14.27□□□□□ -0.12
WNT3AP56704 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
WNT3AP56704 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
WNT3AP56704 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms