Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 PDXDC2P-206ENST00000534700 1315 ntBASIC12.62□□□□□ -0.39
GFRA1P56159 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC12.62□□□□□ -0.39
GFRA1P56159 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
GFRA1P56159 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
GFRA1P56159 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
GFRA1P56159 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
GFRA1P56159 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
GFRA1P56159 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GFRA1P56159 GOLGA8IP-202ENST00000611635 2100 ntBASIC12.62□□□□□ -0.39
GFRA1P56159 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
GFRA1P56159 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
GFRA1P56159 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
GFRA1P56159 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
GFRA1P56159 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
GFRA1P56159 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GFRA1P56159 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GFRA1P56159 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GFRA1P56159 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
GFRA1P56159 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GFRA1P56159 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC12.62□□□□□ -0.39
GFRA1P56159 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
GFRA1P56159 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GFRA1P56159 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
GFRA1P56159 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC12.62□□□□□ -0.39
GFRA1P56159 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
GFRA1P56159 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
GFRA1P56159 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC12.62□□□□□ -0.39
GFRA1P56159 AL354861.1-201ENST00000445213 355 ntBASIC12.62□□□□□ -0.39
GFRA1P56159 RN7SL564P-201ENST00000496309 250 ntBASIC12.62□□□□□ -0.39
GFRA1P56159 RNA5SP417-201ENST00000516459 108 ntBASIC12.62□□□□□ -0.39
GFRA1P56159 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC12.62□□□□□ -0.39
GFRA1P56159 NEU3-207ENST00000534628 746 ntTSL 2 BASIC12.62□□□□□ -0.39
GFRA1P56159 AC007952.4-201ENST00000573866 637 ntBASIC12.62□□□□□ -0.39
GFRA1P56159 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC12.62□□□□□ -0.39
GFRA1P56159 RN7SL555P-201ENST00000584742 339 ntBASIC12.62□□□□□ -0.39
GFRA1P56159 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC12.62□□□□□ -0.39
GFRA1P56159 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC12.62□□□□□ -0.39
GFRA1P56159 AP000322.3-201ENST00000608665 388 ntBASIC12.62□□□□□ -0.39
GFRA1P56159 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC12.62□□□□□ -0.39
GFRA1P56159 AL928654.5-201ENST00000624831 2501 ntBASIC12.62□□□□□ -0.39
GFRA1P56159 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC12.62□□□□□ -0.39
GFRA1P56159 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC12.62□□□□□ -0.39
GFRA1P56159 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
GFRA1P56159 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
GFRA1P56159 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GFRA1P56159 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
GFRA1P56159 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
GFRA1P56159 ODCP-201ENST00000459650 1639 ntBASIC12.62□□□□□ -0.39
GFRA1P56159 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC12.62□□□□□ -0.39
GFRA1P56159 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GFRA1P56159 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
GFRA1P56159 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
GFRA1P56159 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
GFRA1P56159 TUBB4AP1-201ENST00000450755 1325 ntBASIC12.62□□□□□ -0.39
GFRA1P56159 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
GFRA1P56159 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
GFRA1P56159 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
GFRA1P56159 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
GFRA1P56159 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
GFRA1P56159 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC12.61□□□□□ -0.39
GFRA1P56159 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
GFRA1P56159 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
GFRA1P56159 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
GFRA1P56159 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC12.61□□□□□ -0.39
GFRA1P56159 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC12.61□□□□□ -0.39
GFRA1P56159 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
GFRA1P56159 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
GFRA1P56159 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
GFRA1P56159 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
GFRA1P56159 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
GFRA1P56159 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
GFRA1P56159 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
GFRA1P56159 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
GFRA1P56159 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC12.61□□□□□ -0.39
GFRA1P56159 Z69890.1-201ENST00000382990 339 ntBASIC12.61□□□□□ -0.39
GFRA1P56159 NME4-203ENST00000397722 1232 ntTSL 2 BASIC12.61□□□□□ -0.39
GFRA1P56159 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC12.61□□□□□ -0.39
GFRA1P56159 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC12.61□□□□□ -0.39
GFRA1P56159 AC092573.1-201ENST00000433054 884 ntBASIC12.61□□□□□ -0.39
GFRA1P56159 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC12.61□□□□□ -0.39
GFRA1P56159 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC12.61□□□□□ -0.39
GFRA1P56159 RGS5-216ENST00000449680 788 ntTSL 3 BASIC12.61□□□□□ -0.39
GFRA1P56159 AC008267.1-201ENST00000474858 1069 ntBASIC12.61□□□□□ -0.39
GFRA1P56159 COQ10BP2-201ENST00000513804 724 ntBASIC12.61□□□□□ -0.39
GFRA1P56159 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC12.61□□□□□ -0.39
GFRA1P56159 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
GFRA1P56159 KRT8P2-201ENST00000556193 944 ntBASIC12.61□□□□□ -0.39
GFRA1P56159 MIR3180-2-201ENST00000581748 88 ntBASIC12.61□□□□□ -0.39
GFRA1P56159 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
GFRA1P56159 GAS7-216ENST00000583882 553 ntTSL 5 BASIC12.61□□□□□ -0.39
GFRA1P56159 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC12.61□□□□□ -0.39
GFRA1P56159 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC12.61□□□□□ -0.39
GFRA1P56159 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
GFRA1P56159 AC091769.1-201ENST00000619576 568 ntBASIC12.61□□□□□ -0.39
GFRA1P56159 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
GFRA1P56159 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
GFRA1P56159 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
GFRA1P56159 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC12.61□□□□□ -0.39
GFRA1P56159 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
GFRA1P56159 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms