Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC13.21□□□□□ -0.29
EFNA3P52797 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
EFNA3P52797 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.21□□□□□ -0.29
EFNA3P52797 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
EFNA3P52797 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
EFNA3P52797 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC13.21□□□□□ -0.29
EFNA3P52797 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
EFNA3P52797 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC13.21□□□□□ -0.29
EFNA3P52797 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
EFNA3P52797 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC13.21□□□□□ -0.29
EFNA3P52797 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
EFNA3P52797 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
EFNA3P52797 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC13.21□□□□□ -0.29
EFNA3P52797 AC092978.1-202ENST00000637590 1327 ntBASIC13.21□□□□□ -0.29
EFNA3P52797 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
EFNA3P52797 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
EFNA3P52797 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
EFNA3P52797 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
EFNA3P52797 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
EFNA3P52797 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
EFNA3P52797 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
EFNA3P52797 HMGA1P1-201ENST00000415560 1062 ntBASIC13.21□□□□□ -0.29
EFNA3P52797 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC13.21□□□□□ -0.29
EFNA3P52797 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC13.21□□□□□ -0.29
EFNA3P52797 AC098934.1-203ENST00000442868 1262 ntBASIC13.21□□□□□ -0.29
EFNA3P52797 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
EFNA3P52797 RPL18AP3-201ENST00000462885 528 ntBASIC13.21□□□□□ -0.29
EFNA3P52797 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
EFNA3P52797 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
EFNA3P52797 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC13.21□□□□□ -0.29
EFNA3P52797 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC13.21□□□□□ -0.29
EFNA3P52797 AC007952.4-201ENST00000573866 637 ntBASIC13.21□□□□□ -0.29
EFNA3P52797 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC13.21□□□□□ -0.29
EFNA3P52797 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC13.21□□□□□ -0.29
EFNA3P52797 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
EFNA3P52797 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
EFNA3P52797 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC13.21□□□□□ -0.29
EFNA3P52797 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC13.21□□□□□ -0.29
EFNA3P52797 AL928654.5-201ENST00000624831 2501 ntBASIC13.21□□□□□ -0.29
EFNA3P52797 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
EFNA3P52797 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
EFNA3P52797 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
EFNA3P52797 GOLGA8EP-201ENST00000530246 1959 ntBASIC13.21□□□□□ -0.29
EFNA3P52797 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
EFNA3P52797 ABR-228ENST00000574437 3196 ntTSL 5 BASIC13.21□□□□□ -0.3
EFNA3P52797 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
EFNA3P52797 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
EFNA3P52797 AL928921.2-201ENST00000641325 2442 ntBASIC13.21□□□□□ -0.3
EFNA3P52797 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC13.21□□□□□ -0.3
EFNA3P52797 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
EFNA3P52797 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
EFNA3P52797 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.3
EFNA3P52797 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC13.21□□□□□ -0.3
EFNA3P52797 DUT-208ENST00000559540 1441 ntTSL 2 BASIC13.21□□□□□ -0.3
EFNA3P52797 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
EFNA3P52797 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
EFNA3P52797 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC13.21□□□□□ -0.3
EFNA3P52797 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
EFNA3P52797 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.21□□□□□ -0.3
EFNA3P52797 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
EFNA3P52797 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
EFNA3P52797 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
EFNA3P52797 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
EFNA3P52797 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
EFNA3P52797 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
EFNA3P52797 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC13.2□□□□□ -0.3
EFNA3P52797 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC13.2□□□□□ -0.3
EFNA3P52797 AC111170.3-201ENST00000624282 2464 ntBASIC13.2□□□□□ -0.3
EFNA3P52797 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
EFNA3P52797 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
EFNA3P52797 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC13.2□□□□□ -0.3
EFNA3P52797 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
EFNA3P52797 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
EFNA3P52797 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
EFNA3P52797 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
EFNA3P52797 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
EFNA3P52797 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC13.2□□□□□ -0.3
EFNA3P52797 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC13.2□□□□□ -0.3
EFNA3P52797 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.2□□□□□ -0.3
EFNA3P52797 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC13.2□□□□□ -0.3
EFNA3P52797 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
EFNA3P52797 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
EFNA3P52797 PYY2-201ENST00000315776 282 ntBASIC13.2□□□□□ -0.3
EFNA3P52797 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
EFNA3P52797 HLA-DMA-203ENST00000395305 777 ntBASIC13.2□□□□□ -0.3
EFNA3P52797 RPSAP31-201ENST00000416648 895 ntBASIC13.2□□□□□ -0.3
EFNA3P52797 GUSBP10-201ENST00000417412 665 ntBASIC13.2□□□□□ -0.3
EFNA3P52797 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC13.2□□□□□ -0.3
EFNA3P52797 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
EFNA3P52797 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC13.2□□□□□ -0.3
EFNA3P52797 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC13.2□□□□□ -0.3
EFNA3P52797 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC13.2□□□□□ -0.3
EFNA3P52797 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC13.2□□□□□ -0.3
EFNA3P52797 AP002803.1-201ENST00000528836 498 ntBASIC13.2□□□□□ -0.3
EFNA3P52797 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC13.2□□□□□ -0.3
EFNA3P52797 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.2□□□□□ -0.3
EFNA3P52797 TPM1-223ENST00000560445 485 ntTSL 3 BASIC13.2□□□□□ -0.3
EFNA3P52797 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC13.2□□□□□ -0.3
EFNA3P52797 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
EFNA3P52797 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms