Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CPT1AP50416 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CPT1AP50416 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CPT1AP50416 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC15.49■□□□□ 0.07
CPT1AP50416 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.49■□□□□ 0.07
CPT1AP50416 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CPT1AP50416 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CPT1AP50416 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
CPT1AP50416 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CPT1AP50416 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.49■□□□□ 0.07
CPT1AP50416 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CPT1AP50416 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CPT1AP50416 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
CPT1AP50416 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CPT1AP50416 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CPT1AP50416 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CPT1AP50416 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CPT1AP50416 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.49■□□□□ 0.07
CPT1AP50416 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
CPT1AP50416 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CPT1AP50416 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC15.49■□□□□ 0.07
CPT1AP50416 FLAD1-202ENST00000295530 1211 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CPT1AP50416 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CPT1AP50416 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CPT1AP50416 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC15.49■□□□□ 0.07
CPT1AP50416 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC15.49■□□□□ 0.07
CPT1AP50416 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC15.49■□□□□ 0.07
CPT1AP50416 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC15.49■□□□□ 0.07
CPT1AP50416 GGTLC4P-201ENST00000402176 664 ntBASIC15.49■□□□□ 0.07
CPT1AP50416 RPL10-203ENST00000406022 748 ntTSL 3 BASIC15.49■□□□□ 0.07
CPT1AP50416 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC15.49■□□□□ 0.07
CPT1AP50416 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC15.49■□□□□ 0.07
CPT1AP50416 NRADDP-201ENST00000437305 691 ntBASIC15.49■□□□□ 0.07
CPT1AP50416 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CPT1AP50416 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC15.49■□□□□ 0.07
CPT1AP50416 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC15.49■□□□□ 0.07
CPT1AP50416 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC15.49■□□□□ 0.07
CPT1AP50416 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC15.49■□□□□ 0.07
CPT1AP50416 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC15.49■□□□□ 0.07
CPT1AP50416 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC15.49■□□□□ 0.07
CPT1AP50416 ESR1-214ENST00000638569 132 ntTSL 5 BASIC15.49■□□□□ 0.07
CPT1AP50416 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CPT1AP50416 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC15.49■□□□□ 0.07
CPT1AP50416 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CPT1AP50416 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
CPT1AP50416 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CPT1AP50416 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC15.49■□□□□ 0.07
CPT1AP50416 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CPT1AP50416 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC15.49■□□□□ 0.07
CPT1AP50416 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CPT1AP50416 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CPT1AP50416 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC15.49■□□□□ 0.07
CPT1AP50416 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CPT1AP50416 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CPT1AP50416 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC15.49■□□□□ 0.07
CPT1AP50416 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CPT1AP50416 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CPT1AP50416 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC15.48■□□□□ 0.07
CPT1AP50416 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CPT1AP50416 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CPT1AP50416 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
CPT1AP50416 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CPT1AP50416 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CPT1AP50416 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CPT1AP50416 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC15.48■□□□□ 0.07
CPT1AP50416 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC15.48■□□□□ 0.07
CPT1AP50416 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CPT1AP50416 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
CPT1AP50416 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CPT1AP50416 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
CPT1AP50416 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CPT1AP50416 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CPT1AP50416 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CPT1AP50416 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CPT1AP50416 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CPT1AP50416 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CPT1AP50416 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CPT1AP50416 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC15.48■□□□□ 0.07
CPT1AP50416 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CPT1AP50416 HNRNPA1P2-207ENST00000432375 960 ntBASIC15.48■□□□□ 0.07
CPT1AP50416 NALT1-202ENST00000450304 437 ntTSL 3 BASIC15.48■□□□□ 0.07
CPT1AP50416 CITED1-209ENST00000453707 998 ntAPPRIS ALT2 TSL 3 BASIC15.48■□□□□ 0.07
CPT1AP50416 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC15.48■□□□□ 0.07
CPT1AP50416 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
CPT1AP50416 TBC1D3P6-201ENST00000505954 962 ntBASIC15.48■□□□□ 0.07
CPT1AP50416 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.48■□□□□ 0.07
CPT1AP50416 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC15.48■□□□□ 0.07
CPT1AP50416 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC15.48■□□□□ 0.07
CPT1AP50416 SCAMP5-216ENST00000568081 710 ntTSL 2 BASIC15.48■□□□□ 0.07
CPT1AP50416 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC15.48■□□□□ 0.07
CPT1AP50416 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
CPT1AP50416 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC15.48■□□□□ 0.07
CPT1AP50416 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CPT1AP50416 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.48■□□□□ 0.07
CPT1AP50416 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CPT1AP50416 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CPT1AP50416 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.48■□□□□ 0.07
CPT1AP50416 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
CPT1AP50416 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CPT1AP50416 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms