Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ERCC2P18074 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
ERCC2P18074 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ERCC2P18074 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC14.55□□□□□ -0.08
ERCC2P18074 ELK2AP-201ENST00000392510 1007 ntBASIC14.55□□□□□ -0.08
ERCC2P18074 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC14.55□□□□□ -0.08
ERCC2P18074 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ERCC2P18074 BANF1P3-201ENST00000412556 261 ntBASIC14.55□□□□□ -0.08
ERCC2P18074 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC14.55□□□□□ -0.08
ERCC2P18074 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC14.55□□□□□ -0.08
ERCC2P18074 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC14.55□□□□□ -0.08
ERCC2P18074 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC14.55□□□□□ -0.08
ERCC2P18074 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC14.55□□□□□ -0.08
ERCC2P18074 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC14.55□□□□□ -0.08
ERCC2P18074 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC14.55□□□□□ -0.08
ERCC2P18074 AL161670.2-201ENST00000557650 1227 ntBASIC14.55□□□□□ -0.08
ERCC2P18074 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
ERCC2P18074 NAT9-211ENST00000580632 799 ntTSL 3 BASIC14.55□□□□□ -0.08
ERCC2P18074 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC14.55□□□□□ -0.08
ERCC2P18074 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC14.55□□□□□ -0.08
ERCC2P18074 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ERCC2P18074 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
ERCC2P18074 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ERCC2P18074 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC14.55□□□□□ -0.08
ERCC2P18074 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
ERCC2P18074 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ERCC2P18074 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ERCC2P18074 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
ERCC2P18074 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ERCC2P18074 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
ERCC2P18074 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC14.55□□□□□ -0.08
ERCC2P18074 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
ERCC2P18074 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ERCC2P18074 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
ERCC2P18074 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ERCC2P18074 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ERCC2P18074 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC14.55□□□□□ -0.08
ERCC2P18074 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ERCC2P18074 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ERCC2P18074 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC14.55□□□□□ -0.08
ERCC2P18074 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC14.55□□□□□ -0.08
ERCC2P18074 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC14.55□□□□□ -0.08
ERCC2P18074 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
ERCC2P18074 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
ERCC2P18074 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ERCC2P18074 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ERCC2P18074 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ERCC2P18074 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC14.54□□□□□ -0.08
ERCC2P18074 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC14.54□□□□□ -0.08
ERCC2P18074 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
ERCC2P18074 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ERCC2P18074 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ERCC2P18074 BX679664.3-201ENST00000414070 555 ntBASIC14.54□□□□□ -0.08
ERCC2P18074 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC14.54□□□□□ -0.08
ERCC2P18074 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ERCC2P18074 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC14.54□□□□□ -0.08
ERCC2P18074 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC14.54□□□□□ -0.08
ERCC2P18074 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC14.54□□□□□ -0.08
ERCC2P18074 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC14.54□□□□□ -0.08
ERCC2P18074 AC012618.1-201ENST00000461223 412 ntBASIC14.54□□□□□ -0.08
ERCC2P18074 AC113935.1-201ENST00000471722 555 ntBASIC14.54□□□□□ -0.08
ERCC2P18074 AC024681.1-201ENST00000521917 487 ntBASIC14.54□□□□□ -0.08
ERCC2P18074 ADM-202ENST00000524948 584 ntTSL 2 BASIC14.54□□□□□ -0.08
ERCC2P18074 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
ERCC2P18074 PHBP15-201ENST00000574228 665 ntBASIC14.54□□□□□ -0.08
ERCC2P18074 AL109837.1-201ENST00000603272 613 ntBASIC14.54□□□□□ -0.08
ERCC2P18074 AL021707.6-201ENST00000609212 491 ntBASIC14.54□□□□□ -0.08
ERCC2P18074 LINC01783-202ENST00000614408 828 ntBASIC14.54□□□□□ -0.08
ERCC2P18074 TP53-221ENST00000615910 1149 ntTSL 5 BASIC14.54□□□□□ -0.08
ERCC2P18074 BX284668.2-205ENST00000619677 828 ntBASIC14.54□□□□□ -0.08
ERCC2P18074 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC14.54□□□□□ -0.08
ERCC2P18074 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC14.54□□□□□ -0.08
ERCC2P18074 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
ERCC2P18074 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ERCC2P18074 AC008620.2-201ENST00000510294 1569 ntBASIC14.54□□□□□ -0.08
ERCC2P18074 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC14.54□□□□□ -0.08
ERCC2P18074 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC14.54□□□□□ -0.08
ERCC2P18074 ARHGAP23P1-201ENST00000562773 1937 ntBASIC14.54□□□□□ -0.08
ERCC2P18074 NCLP1-201ENST00000445357 1963 ntBASIC14.54□□□□□ -0.08
ERCC2P18074 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ERCC2P18074 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ERCC2P18074 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
ERCC2P18074 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ERCC2P18074 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
ERCC2P18074 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ERCC2P18074 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ERCC2P18074 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ERCC2P18074 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC14.53□□□□□ -0.08
ERCC2P18074 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ERCC2P18074 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
ERCC2P18074 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
ERCC2P18074 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
ERCC2P18074 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC14.53□□□□□ -0.08
ERCC2P18074 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
ERCC2P18074 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ERCC2P18074 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
ERCC2P18074 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ERCC2P18074 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
ERCC2P18074 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ERCC2P18074 MARK2P9-201ENST00000430958 1727 ntBASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms