Protein–RNA interactions for Protein: P07498

CSN3, Kappa-casein, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSN3P07498 AL096828.3-201ENST00000615354 462 ntBASIC11.28□□□□□ -0.6
CSN3P07498 MIR6869-201ENST00000619434 62 ntBASIC11.28□□□□□ -0.6
CSN3P07498 ABBA01031663.1-201ENST00000635630 790 ntBASIC11.28□□□□□ -0.6
CSN3P07498 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
CSN3P07498 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
CSN3P07498 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CSN3P07498 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CSN3P07498 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CSN3P07498 TRPM2-203ENST00000397928 6221 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
CSN3P07498 MST1R-201ENST00000296474 4536 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
CSN3P07498 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CSN3P07498 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CSN3P07498 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CSN3P07498 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC11.28□□□□□ -0.6
CSN3P07498 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
CSN3P07498 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
CSN3P07498 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CSN3P07498 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC11.28□□□□□ -0.6
CSN3P07498 LDLRAD4-201ENST00000359446 8486 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CSN3P07498 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CSN3P07498 WTIP-202ENST00000590071 13665 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CSN3P07498 SMAD2-203ENST00000402690 12075 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CSN3P07498 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CSN3P07498 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CSN3P07498 CNTNAP5-202ENST00000431078 5284 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CSN3P07498 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
CSN3P07498 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC11.27□□□□□ -0.6
CSN3P07498 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC11.27□□□□□ -0.6
CSN3P07498 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
CSN3P07498 SDC3-201ENST00000336798 6392 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
CSN3P07498 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
CSN3P07498 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
CSN3P07498 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
CSN3P07498 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
CSN3P07498 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
CSN3P07498 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
CSN3P07498 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.6
CSN3P07498 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
CSN3P07498 FBN1-201ENST00000316623 11756 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
CSN3P07498 GOLGA6L4-202ENST00000422563 4155 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
CSN3P07498 USP4-203ENST00000415188 1454 ntTSL 3 BASIC11.27□□□□□ -0.6
CSN3P07498 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC11.27□□□□□ -0.6
CSN3P07498 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC11.27□□□□□ -0.61
CSN3P07498 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
CSN3P07498 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
CSN3P07498 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
CSN3P07498 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CSN3P07498 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC11.27□□□□□ -0.61
CSN3P07498 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
CSN3P07498 RPS3-201ENST00000278572 907 ntTSL 3 BASIC11.27□□□□□ -0.61
CSN3P07498 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CSN3P07498 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
CSN3P07498 MIR663B-201ENST00000408361 115 ntBASIC11.27□□□□□ -0.61
CSN3P07498 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
CSN3P07498 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
CSN3P07498 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC11.27□□□□□ -0.61
CSN3P07498 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
CSN3P07498 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CSN3P07498 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC11.27□□□□□ -0.61
CSN3P07498 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC11.27□□□□□ -0.61
CSN3P07498 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC11.27□□□□□ -0.61
CSN3P07498 FAM8A2P-201ENST00000528813 1142 ntBASIC11.27□□□□□ -0.61
CSN3P07498 AGER-214ENST00000538695 487 ntTSL 2 BASIC11.27□□□□□ -0.61
CSN3P07498 USB1-203ENST00000539737 1212 ntTSL 2 BASIC11.27□□□□□ -0.61
CSN3P07498 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC11.27□□□□□ -0.61
CSN3P07498 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CSN3P07498 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC11.27□□□□□ -0.61
CSN3P07498 AC104982.3-201ENST00000581995 514 ntBASIC11.27□□□□□ -0.61
CSN3P07498 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
CSN3P07498 AC008825.2-201ENST00000603374 718 ntBASIC11.27□□□□□ -0.61
CSN3P07498 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
CSN3P07498 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
CSN3P07498 ADCY7-201ENST00000254235 6138 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CSN3P07498 DGKD-202ENST00000409813 6228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
CSN3P07498 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
CSN3P07498 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC11.27□□□□□ -0.61
CSN3P07498 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
CSN3P07498 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CSN3P07498 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
CSN3P07498 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC11.27□□□□□ -0.61
CSN3P07498 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC11.27□□□□□ -0.61
CSN3P07498 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
CSN3P07498 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CSN3P07498 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
CSN3P07498 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
CSN3P07498 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
CSN3P07498 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
CSN3P07498 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
CSN3P07498 ANKRD36B-204ENST00000438709 6067 ntTSL 5 BASIC11.27□□□□□ -0.61
CSN3P07498 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC11.27□□□□□ -0.61
CSN3P07498 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC11.27□□□□□ -0.61
CSN3P07498 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
CSN3P07498 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CSN3P07498 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
CSN3P07498 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CSN3P07498 BRWD1-204ENST00000380800 7605 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
CSN3P07498 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC11.26□□□□□ -0.61
CSN3P07498 SHC1P1-201ENST00000425230 1745 ntBASIC11.26□□□□□ -0.61
CSN3P07498 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
CSN3P07498 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC11.26□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms