Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
APPP05067 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC17.04■□□□□ 0.32
APPP05067 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC17.04■□□□□ 0.32
APPP05067 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC17.04■□□□□ 0.32
APPP05067 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
APPP05067 RPL8P2-201ENST00000430538 502 ntBASIC17.04■□□□□ 0.32
APPP05067 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
APPP05067 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC17.04■□□□□ 0.32
APPP05067 RN7SL769P-201ENST00000469386 295 ntBASIC17.04■□□□□ 0.32
APPP05067 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC17.04■□□□□ 0.32
APPP05067 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC17.04■□□□□ 0.32
APPP05067 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC17.04■□□□□ 0.32
APPP05067 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC17.04■□□□□ 0.32
APPP05067 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
APPP05067 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
APPP05067 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
APPP05067 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC17.04■□□□□ 0.32
APPP05067 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
APPP05067 GOLGA8VP-201ENST00000559009 1798 ntBASIC17.04■□□□□ 0.32
APPP05067 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
APPP05067 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC17.04■□□□□ 0.32
APPP05067 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC17.04■□□□□ 0.32
APPP05067 AL157996.1-201ENST00000624684 2299 ntBASIC17.04■□□□□ 0.32
APPP05067 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
APPP05067 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC17.04■□□□□ 0.32
APPP05067 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
APPP05067 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
APPP05067 AL139385.1-201ENST00000611744 3272 ntBASIC17.04■□□□□ 0.32
APPP05067 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
APPP05067 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
APPP05067 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
APPP05067 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
APPP05067 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
APPP05067 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
APPP05067 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC17.03■□□□□ 0.32
APPP05067 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
APPP05067 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
APPP05067 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
APPP05067 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
APPP05067 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
APPP05067 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
APPP05067 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
APPP05067 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
APPP05067 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
APPP05067 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
APPP05067 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC17.03■□□□□ 0.32
APPP05067 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
APPP05067 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
APPP05067 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
APPP05067 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
APPP05067 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC17.03■□□□□ 0.32
APPP05067 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
APPP05067 AL583805.1-201ENST00000391389 531 ntBASIC17.03■□□□□ 0.32
APPP05067 HMGA1P1-201ENST00000415560 1062 ntBASIC17.03■□□□□ 0.32
APPP05067 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC17.03■□□□□ 0.32
APPP05067 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
APPP05067 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC17.03■□□□□ 0.32
APPP05067 RN7SL67P-201ENST00000492147 296 ntBASIC17.03■□□□□ 0.32
APPP05067 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC17.03■□□□□ 0.32
APPP05067 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC17.03■□□□□ 0.32
APPP05067 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC17.03■□□□□ 0.32
APPP05067 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
APPP05067 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC17.03■□□□□ 0.32
APPP05067 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC17.03■□□□□ 0.32
APPP05067 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC17.03■□□□□ 0.32
APPP05067 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
APPP05067 AC079336.7-201ENST00000623428 1078 ntBASIC17.03■□□□□ 0.32
APPP05067 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC17.03■□□□□ 0.32
APPP05067 AC068587.10-201ENST00000641210 219 ntBASIC17.03■□□□□ 0.32
APPP05067 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
APPP05067 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
APPP05067 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC17.03■□□□□ 0.32
APPP05067 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
APPP05067 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
APPP05067 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
APPP05067 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
APPP05067 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
APPP05067 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
APPP05067 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC17.03■□□□□ 0.32
APPP05067 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
APPP05067 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
APPP05067 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
APPP05067 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC17.03■□□□□ 0.32
APPP05067 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
APPP05067 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
APPP05067 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
APPP05067 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
APPP05067 CAP2P1-201ENST00000557743 1390 ntBASIC17.02■□□□□ 0.32
APPP05067 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
APPP05067 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
APPP05067 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
APPP05067 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC17.02■□□□□ 0.32
APPP05067 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
APPP05067 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
APPP05067 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC17.02■□□□□ 0.32
APPP05067 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
APPP05067 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
APPP05067 AL590824.1-201ENST00000403828 1349 ntBASIC17.02■□□□□ 0.32
APPP05067 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
APPP05067 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms