Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
MT-ND1P03886 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
MT-ND1P03886 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
MT-ND1P03886 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC13.42□□□□□ -0.26
MT-ND1P03886 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC13.42□□□□□ -0.26
MT-ND1P03886 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC13.42□□□□□ -0.26
MT-ND1P03886 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
MT-ND1P03886 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
MT-ND1P03886 AC026271.4-201ENST00000578214 1833 ntBASIC13.42□□□□□ -0.26
MT-ND1P03886 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
MT-ND1P03886 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC13.42□□□□□ -0.26
MT-ND1P03886 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
MT-ND1P03886 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
MT-ND1P03886 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
MT-ND1P03886 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC13.42□□□□□ -0.26
MT-ND1P03886 RN7SKP175-201ENST00000408472 289 ntBASIC13.42□□□□□ -0.26
MT-ND1P03886 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC13.42□□□□□ -0.26
MT-ND1P03886 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
MT-ND1P03886 PNKD-204ENST00000436005 978 ntTSL 5 BASIC13.42□□□□□ -0.26
MT-ND1P03886 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
MT-ND1P03886 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC13.42□□□□□ -0.26
MT-ND1P03886 ALG3P1-201ENST00000508806 1114 ntBASIC13.42□□□□□ -0.26
MT-ND1P03886 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
MT-ND1P03886 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
MT-ND1P03886 AC068587.3-201ENST00000526613 355 ntBASIC13.42□□□□□ -0.26
MT-ND1P03886 TDH-203ENST00000531764 1110 ntBASIC13.42□□□□□ -0.26
MT-ND1P03886 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC13.42□□□□□ -0.26
MT-ND1P03886 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
MT-ND1P03886 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC13.42□□□□□ -0.26
MT-ND1P03886 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
MT-ND1P03886 AL138709.1-201ENST00000614840 1693 ntBASIC13.42□□□□□ -0.26
MT-ND1P03886 DRD2-208ENST00000542968 2467 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
MT-ND1P03886 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
MT-ND1P03886 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
MT-ND1P03886 ZNF706-209ENST00000520347 3502 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
MT-ND1P03886 PIGG-217ENST00000509768 3121 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
MT-ND1P03886 MOCS1-204ENST00000373188 3358 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
MT-ND1P03886 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
MT-ND1P03886 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
MT-ND1P03886 TRPC7-202ENST00000378459 2406 ntTSL 5 BASIC13.42□□□□□ -0.26
MT-ND1P03886 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
MT-ND1P03886 ABCD1P2-201ENST00000429313 1601 ntBASIC13.42□□□□□ -0.26
MT-ND1P03886 PPP1R26P2-201ENST00000611403 3595 ntBASIC13.42□□□□□ -0.26
MT-ND1P03886 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
MT-ND1P03886 LINC00638-201ENST00000555578 2518 ntBASIC13.42□□□□□ -0.26
MT-ND1P03886 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
MT-ND1P03886 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
MT-ND1P03886 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
MT-ND1P03886 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
MT-ND1P03886 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
MT-ND1P03886 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
MT-ND1P03886 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
MT-ND1P03886 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
MT-ND1P03886 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC13.41□□□□□ -0.26
MT-ND1P03886 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
MT-ND1P03886 AC019205.2-203ENST00000421315 3362 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
MT-ND1P03886 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
MT-ND1P03886 PDIA3P1-201ENST00000471856 1510 ntBASIC13.41□□□□□ -0.26
MT-ND1P03886 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
MT-ND1P03886 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
MT-ND1P03886 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC13.41□□□□□ -0.26
MT-ND1P03886 AK2P2-201ENST00000439142 405 ntBASIC13.41□□□□□ -0.26
MT-ND1P03886 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC13.41□□□□□ -0.26
MT-ND1P03886 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
MT-ND1P03886 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC13.41□□□□□ -0.26
MT-ND1P03886 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
MT-ND1P03886 MIR5189-201ENST00000577370 114 ntBASIC13.41□□□□□ -0.26
MT-ND1P03886 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC13.41□□□□□ -0.26
MT-ND1P03886 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC13.41□□□□□ -0.26
MT-ND1P03886 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
MT-ND1P03886 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
MT-ND1P03886 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC13.41□□□□□ -0.26
MT-ND1P03886 GRAMD1B-216ENST00000638157 3849 ntTSL 5 BASIC13.41□□□□□ -0.26
MT-ND1P03886 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC13.41□□□□□ -0.26
MT-ND1P03886 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
MT-ND1P03886 ADM2-202ENST00000395738 4276 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
MT-ND1P03886 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
MT-ND1P03886 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
MT-ND1P03886 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC13.41□□□□□ -0.26
MT-ND1P03886 ABL2-207ENST00000507173 3177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
MT-ND1P03886 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC13.41□□□□□ -0.26
MT-ND1P03886 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
MT-ND1P03886 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC13.41□□□□□ -0.26
MT-ND1P03886 GLIS3-202ENST00000381971 3961 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
MT-ND1P03886 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC13.41□□□□□ -0.26
MT-ND1P03886 ELN-234ENST00000621115 3452 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
MT-ND1P03886 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
MT-ND1P03886 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
MT-ND1P03886 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
MT-ND1P03886 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
MT-ND1P03886 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
MT-ND1P03886 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
MT-ND1P03886 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
MT-ND1P03886 RSPO2-202ENST00000517781 2748 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
MT-ND1P03886 B4GALT4-201ENST00000359213 2385 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
MT-ND1P03886 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
MT-ND1P03886 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
MT-ND1P03886 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
MT-ND1P03886 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
MT-ND1P03886 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms