Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC14.25□□□□□ -0.13
RFPL1O75677 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RFPL1O75677 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RFPL1O75677 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
RFPL1O75677 AL512310.5-201ENST00000551999 515 ntBASIC14.25□□□□□ -0.13
RFPL1O75677 JPT2-214ENST00000569765 782 ntTSL 2 BASIC14.25□□□□□ -0.13
RFPL1O75677 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
RFPL1O75677 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC14.25□□□□□ -0.13
RFPL1O75677 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC14.25□□□□□ -0.13
RFPL1O75677 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
RFPL1O75677 AC021016.3-201ENST00000608367 477 ntBASIC14.25□□□□□ -0.13
RFPL1O75677 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC14.25□□□□□ -0.13
RFPL1O75677 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
RFPL1O75677 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC14.25□□□□□ -0.13
RFPL1O75677 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RFPL1O75677 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RFPL1O75677 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RFPL1O75677 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RFPL1O75677 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC14.25□□□□□ -0.13
RFPL1O75677 PCDHB18P-202ENST00000526308 3197 ntBASIC14.25□□□□□ -0.13
RFPL1O75677 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RFPL1O75677 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RFPL1O75677 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
RFPL1O75677 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RFPL1O75677 C8orf49-201ENST00000525043 1968 ntBASIC14.25□□□□□ -0.13
RFPL1O75677 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC14.25□□□□□ -0.13
RFPL1O75677 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RFPL1O75677 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
RFPL1O75677 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RFPL1O75677 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RFPL1O75677 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RFPL1O75677 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RFPL1O75677 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RFPL1O75677 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RFPL1O75677 AC061965.1-201ENST00000560524 1465 ntBASIC14.25□□□□□ -0.13
RFPL1O75677 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RFPL1O75677 RET-205ENST00000615310 4337 ntTSL 5 BASIC14.24□□□□□ -0.13
RFPL1O75677 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
RFPL1O75677 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC14.24□□□□□ -0.13
RFPL1O75677 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RFPL1O75677 AC108024.1-201ENST00000626286 1721 ntBASIC14.24□□□□□ -0.13
RFPL1O75677 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC14.24□□□□□ -0.13
RFPL1O75677 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RFPL1O75677 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC14.24□□□□□ -0.13
RFPL1O75677 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RFPL1O75677 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.24□□□□□ -0.13
RFPL1O75677 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
RFPL1O75677 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RFPL1O75677 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RFPL1O75677 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RFPL1O75677 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RFPL1O75677 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC14.24□□□□□ -0.13
RFPL1O75677 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC14.24□□□□□ -0.13
RFPL1O75677 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
RFPL1O75677 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
RFPL1O75677 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RFPL1O75677 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RFPL1O75677 RBM38-204ENST00000371219 760 ntTSL 2 BASIC14.24□□□□□ -0.13
RFPL1O75677 AL662890.1-201ENST00000396818 632 ntBASIC14.24□□□□□ -0.13
RFPL1O75677 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC14.24□□□□□ -0.13
RFPL1O75677 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC14.24□□□□□ -0.13
RFPL1O75677 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC14.24□□□□□ -0.13
RFPL1O75677 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC14.24□□□□□ -0.13
RFPL1O75677 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC14.24□□□□□ -0.13
RFPL1O75677 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC14.24□□□□□ -0.13
RFPL1O75677 FNTAP2-201ENST00000430308 634 ntBASIC14.24□□□□□ -0.13
RFPL1O75677 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC14.24□□□□□ -0.13
RFPL1O75677 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC14.24□□□□□ -0.13
RFPL1O75677 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC14.24□□□□□ -0.13
RFPL1O75677 RERG-205ENST00000537647 935 ntTSL 2 BASIC14.24□□□□□ -0.13
RFPL1O75677 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
RFPL1O75677 FOS-206ENST00000555347 1280 ntTSL 2 BASIC14.24□□□□□ -0.13
RFPL1O75677 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC14.24□□□□□ -0.13
RFPL1O75677 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC14.24□□□□□ -0.13
RFPL1O75677 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC14.24□□□□□ -0.13
RFPL1O75677 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC14.24□□□□□ -0.13
RFPL1O75677 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC14.24□□□□□ -0.13
RFPL1O75677 AC132192.2-201ENST00000596206 1147 ntBASIC14.24□□□□□ -0.13
RFPL1O75677 DIO1-215ENST00000610607 796 ntTSL 5 BASIC14.24□□□□□ -0.13
RFPL1O75677 ZACNP1-201ENST00000612259 710 ntBASIC14.24□□□□□ -0.13
RFPL1O75677 AL096828.3-201ENST00000615354 462 ntBASIC14.24□□□□□ -0.13
RFPL1O75677 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
RFPL1O75677 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RFPL1O75677 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
RFPL1O75677 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC14.24□□□□□ -0.13
RFPL1O75677 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RFPL1O75677 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC14.24□□□□□ -0.13
RFPL1O75677 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
RFPL1O75677 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RFPL1O75677 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
RFPL1O75677 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
RFPL1O75677 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
RFPL1O75677 E2F3P2-201ENST00000447755 1422 ntBASIC14.24□□□□□ -0.13
RFPL1O75677 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
RFPL1O75677 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
RFPL1O75677 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RFPL1O75677 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RFPL1O75677 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RFPL1O75677 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC14.23□□□□□ -0.13
RFPL1O75677 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms