Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NPIPB4C9JG80 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NPIPB4C9JG80 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC12.48□□□□□ -0.41
NPIPB4C9JG80 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
NPIPB4C9JG80 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
NPIPB4C9JG80 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
NPIPB4C9JG80 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC12.47□□□□□ -0.41
NPIPB4C9JG80 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
NPIPB4C9JG80 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
NPIPB4C9JG80 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
NPIPB4C9JG80 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC12.47□□□□□ -0.41
NPIPB4C9JG80 AC024075.2-201ENST00000598112 1473 ntBASIC12.47□□□□□ -0.41
NPIPB4C9JG80 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NPIPB4C9JG80 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NPIPB4C9JG80 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
NPIPB4C9JG80 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
NPIPB4C9JG80 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC12.47□□□□□ -0.41
NPIPB4C9JG80 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC12.47□□□□□ -0.41
NPIPB4C9JG80 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NPIPB4C9JG80 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC12.47□□□□□ -0.41
NPIPB4C9JG80 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
NPIPB4C9JG80 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC12.47□□□□□ -0.41
NPIPB4C9JG80 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
NPIPB4C9JG80 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NPIPB4C9JG80 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NPIPB4C9JG80 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
NPIPB4C9JG80 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
NPIPB4C9JG80 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NPIPB4C9JG80 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NPIPB4C9JG80 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
NPIPB4C9JG80 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
NPIPB4C9JG80 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
NPIPB4C9JG80 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NPIPB4C9JG80 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC12.47□□□□□ -0.41
NPIPB4C9JG80 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
NPIPB4C9JG80 DNAJB1P1-201ENST00000429417 1024 ntBASIC12.47□□□□□ -0.41
NPIPB4C9JG80 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC12.47□□□□□ -0.41
NPIPB4C9JG80 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC12.47□□□□□ -0.41
NPIPB4C9JG80 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC12.47□□□□□ -0.41
NPIPB4C9JG80 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC12.47□□□□□ -0.41
NPIPB4C9JG80 POU5F1P2-201ENST00000521750 823 ntBASIC12.47□□□□□ -0.41
NPIPB4C9JG80 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC12.47□□□□□ -0.41
NPIPB4C9JG80 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
NPIPB4C9JG80 MIR3940-201ENST00000579148 102 ntBASIC12.47□□□□□ -0.41
NPIPB4C9JG80 AC020914.3-201ENST00000594712 304 ntBASIC12.47□□□□□ -0.41
NPIPB4C9JG80 AL133467.4-201ENST00000602953 725 ntBASIC12.47□□□□□ -0.41
NPIPB4C9JG80 MEG3_2.1-201ENST00000611456 105 ntBASIC12.47□□□□□ -0.41
NPIPB4C9JG80 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
NPIPB4C9JG80 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC12.47□□□□□ -0.41
NPIPB4C9JG80 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NPIPB4C9JG80 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NPIPB4C9JG80 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC12.47□□□□□ -0.41
NPIPB4C9JG80 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
NPIPB4C9JG80 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC12.47□□□□□ -0.41
NPIPB4C9JG80 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
NPIPB4C9JG80 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
NPIPB4C9JG80 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NPIPB4C9JG80 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
NPIPB4C9JG80 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC12.47□□□□□ -0.41
NPIPB4C9JG80 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
NPIPB4C9JG80 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
NPIPB4C9JG80 AC073862.5-201ENST00000624129 2027 ntBASIC12.47□□□□□ -0.41
NPIPB4C9JG80 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NPIPB4C9JG80 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC12.47□□□□□ -0.41
NPIPB4C9JG80 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
NPIPB4C9JG80 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
NPIPB4C9JG80 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC12.47□□□□□ -0.41
NPIPB4C9JG80 CICP17-201ENST00000418553 2377 ntBASIC12.47□□□□□ -0.41
NPIPB4C9JG80 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC12.47□□□□□ -0.41
NPIPB4C9JG80 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
NPIPB4C9JG80 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
NPIPB4C9JG80 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
NPIPB4C9JG80 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
NPIPB4C9JG80 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.41
NPIPB4C9JG80 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC12.46□□□□□ -0.41
NPIPB4C9JG80 ST20-AS1-201ENST00000560255 4223 ntBASIC12.46□□□□□ -0.41
NPIPB4C9JG80 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
NPIPB4C9JG80 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.41
NPIPB4C9JG80 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
NPIPB4C9JG80 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC12.46□□□□□ -0.41
NPIPB4C9JG80 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
NPIPB4C9JG80 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
NPIPB4C9JG80 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
NPIPB4C9JG80 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
NPIPB4C9JG80 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
NPIPB4C9JG80 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
NPIPB4C9JG80 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
NPIPB4C9JG80 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC12.46□□□□□ -0.41
NPIPB4C9JG80 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
NPIPB4C9JG80 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
NPIPB4C9JG80 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.41
NPIPB4C9JG80 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
NPIPB4C9JG80 BANF1P3-201ENST00000412556 261 ntBASIC12.46□□□□□ -0.41
NPIPB4C9JG80 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC12.46□□□□□ -0.41
NPIPB4C9JG80 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
NPIPB4C9JG80 HNRNPA1P2-207ENST00000432375 960 ntBASIC12.46□□□□□ -0.41
NPIPB4C9JG80 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC12.46□□□□□ -0.41
NPIPB4C9JG80 BX284668.4-201ENST00000453917 508 ntBASIC12.46□□□□□ -0.41
NPIPB4C9JG80 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC12.46□□□□□ -0.41
NPIPB4C9JG80 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC12.46□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms