Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC12.16□□□□□ -0.46
TMEM235A6NFC5 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
TMEM235A6NFC5 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TMEM235A6NFC5 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
TMEM235A6NFC5 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TMEM235A6NFC5 TMOD1-201ENST00000259365 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TMEM235A6NFC5 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
TMEM235A6NFC5 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC12.15□□□□□ -0.46
TMEM235A6NFC5 MAT2B-204ENST00000518095 3409 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TMEM235A6NFC5 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TMEM235A6NFC5 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TMEM235A6NFC5 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TMEM235A6NFC5 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TMEM235A6NFC5 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC12.15□□□□□ -0.46
TMEM235A6NFC5 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TMEM235A6NFC5 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC12.15□□□□□ -0.46
TMEM235A6NFC5 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC12.15□□□□□ -0.46
TMEM235A6NFC5 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
TMEM235A6NFC5 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
TMEM235A6NFC5 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
TMEM235A6NFC5 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC12.15□□□□□ -0.46
TMEM235A6NFC5 MSNP1-201ENST00000511640 1732 ntBASIC12.15□□□□□ -0.46
TMEM235A6NFC5 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TMEM235A6NFC5 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TMEM235A6NFC5 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC12.15□□□□□ -0.46
TMEM235A6NFC5 PAX8-203ENST00000348715 3966 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TMEM235A6NFC5 DPY19L2P2-205ENST00000439473 3994 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TMEM235A6NFC5 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TMEM235A6NFC5 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TMEM235A6NFC5 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TMEM235A6NFC5 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TMEM235A6NFC5 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.46
TMEM235A6NFC5 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TMEM235A6NFC5 TPM3P8-201ENST00000330554 643 ntBASIC12.15□□□□□ -0.46
TMEM235A6NFC5 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TMEM235A6NFC5 NSL1-201ENST00000366976 722 ntTSL 2 BASIC12.15□□□□□ -0.46
TMEM235A6NFC5 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC12.15□□□□□ -0.46
TMEM235A6NFC5 NEU3-203ENST00000529024 581 ntTSL 3 BASIC12.15□□□□□ -0.46
TMEM235A6NFC5 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC12.15□□□□□ -0.46
TMEM235A6NFC5 PAM16-204ENST00000571941 674 ntTSL 3 BASIC12.15□□□□□ -0.46
TMEM235A6NFC5 MIR4683-201ENST00000579659 81 ntBASIC12.15□□□□□ -0.46
TMEM235A6NFC5 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TMEM235A6NFC5 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC12.15□□□□□ -0.46
TMEM235A6NFC5 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TMEM235A6NFC5 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC12.15□□□□□ -0.46
TMEM235A6NFC5 AC027601.3-201ENST00000622907 509 ntBASIC12.15□□□□□ -0.46
TMEM235A6NFC5 ABBA01031660.1-201ENST00000635219 756 ntBASIC12.15□□□□□ -0.46
TMEM235A6NFC5 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TMEM235A6NFC5 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC12.15□□□□□ -0.46
TMEM235A6NFC5 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC12.15□□□□□ -0.46
TMEM235A6NFC5 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC12.15□□□□□ -0.46
TMEM235A6NFC5 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC12.15□□□□□ -0.46
TMEM235A6NFC5 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TMEM235A6NFC5 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TMEM235A6NFC5 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TMEM235A6NFC5 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
TMEM235A6NFC5 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TMEM235A6NFC5 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC12.15□□□□□ -0.46
TMEM235A6NFC5 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
TMEM235A6NFC5 NFATC1-203ENST00000329101 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
TMEM235A6NFC5 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
TMEM235A6NFC5 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TMEM235A6NFC5 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TMEM235A6NFC5 AL391825.1-201ENST00000457671 1364 ntBASIC12.15□□□□□ -0.46
TMEM235A6NFC5 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC12.15□□□□□ -0.46
TMEM235A6NFC5 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TMEM235A6NFC5 AMDHD2-202ENST00000302956 3273 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TMEM235A6NFC5 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
TMEM235A6NFC5 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.47
TMEM235A6NFC5 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC12.15□□□□□ -0.47
TMEM235A6NFC5 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
TMEM235A6NFC5 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
TMEM235A6NFC5 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TMEM235A6NFC5 AC061965.1-201ENST00000560524 1465 ntBASIC12.14□□□□□ -0.47
TMEM235A6NFC5 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
TMEM235A6NFC5 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TMEM235A6NFC5 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TMEM235A6NFC5 CCNY-203ENST00000374704 3960 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
TMEM235A6NFC5 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC12.14□□□□□ -0.47
TMEM235A6NFC5 KRT18P28-201ENST00000453838 1332 ntBASIC12.14□□□□□ -0.47
TMEM235A6NFC5 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TMEM235A6NFC5 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC12.14□□□□□ -0.47
TMEM235A6NFC5 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TMEM235A6NFC5 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
TMEM235A6NFC5 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC12.14□□□□□ -0.47
TMEM235A6NFC5 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TMEM235A6NFC5 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
TMEM235A6NFC5 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TMEM235A6NFC5 AC244453.2-201ENST00000457996 3543 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TMEM235A6NFC5 PPT2-EGFL8-202ENST00000422437 4181 ntAPPRIS P5 TSL 5 BASIC12.14□□□□□ -0.47
TMEM235A6NFC5 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TMEM235A6NFC5 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TMEM235A6NFC5 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC12.14□□□□□ -0.47
TMEM235A6NFC5 USO1-201ENST00000264904 4135 ntTSL 2 BASIC12.14□□□□□ -0.47
TMEM235A6NFC5 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
TMEM235A6NFC5 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TMEM235A6NFC5 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
TMEM235A6NFC5 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TMEM235A6NFC5 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC12.14□□□□□ -0.47
TMEM235A6NFC5 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms