Protein–RNA interactions for Protein: A4FU28

CTAGE9, cTAGE family member 9, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTAGE9A4FU28 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CTAGE9A4FU28 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC15.17■□□□□ 0.02
CTAGE9A4FU28 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
CTAGE9A4FU28 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CTAGE9A4FU28 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC15.17■□□□□ 0.02
CTAGE9A4FU28 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CTAGE9A4FU28 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CTAGE9A4FU28 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CTAGE9A4FU28 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
CTAGE9A4FU28 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CTAGE9A4FU28 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CTAGE9A4FU28 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC15.17■□□□□ 0.02
CTAGE9A4FU28 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
CTAGE9A4FU28 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC15.17■□□□□ 0.02
CTAGE9A4FU28 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CTAGE9A4FU28 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CTAGE9A4FU28 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CTAGE9A4FU28 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC15.17■□□□□ 0.02
CTAGE9A4FU28 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
CTAGE9A4FU28 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CTAGE9A4FU28 SLC7A15P-201ENST00000424028 1363 ntBASIC15.17■□□□□ 0.02
CTAGE9A4FU28 MIR770-201ENST00000390219 98 ntBASIC15.17■□□□□ 0.02
CTAGE9A4FU28 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CTAGE9A4FU28 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CTAGE9A4FU28 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CTAGE9A4FU28 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CTAGE9A4FU28 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC15.17■□□□□ 0.02
CTAGE9A4FU28 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC15.17■□□□□ 0.02
CTAGE9A4FU28 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CTAGE9A4FU28 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC15.17■□□□□ 0.02
CTAGE9A4FU28 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC15.17■□□□□ 0.02
CTAGE9A4FU28 UGT1A2P-201ENST00000454886 866 ntBASIC15.17■□□□□ 0.02
CTAGE9A4FU28 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC15.17■□□□□ 0.02
CTAGE9A4FU28 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC15.17■□□□□ 0.02
CTAGE9A4FU28 AC090617.6-201ENST00000572790 443 ntTSL 3 BASIC15.17■□□□□ 0.02
CTAGE9A4FU28 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC15.17■□□□□ 0.02
CTAGE9A4FU28 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC15.17■□□□□ 0.02
CTAGE9A4FU28 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC15.17■□□□□ 0.02
CTAGE9A4FU28 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CTAGE9A4FU28 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CTAGE9A4FU28 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CTAGE9A4FU28 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
CTAGE9A4FU28 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CTAGE9A4FU28 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC15.17■□□□□ 0.02
CTAGE9A4FU28 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CTAGE9A4FU28 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
CTAGE9A4FU28 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CTAGE9A4FU28 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CTAGE9A4FU28 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC15.17■□□□□ 0.02
CTAGE9A4FU28 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC15.17■□□□□ 0.02
CTAGE9A4FU28 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CTAGE9A4FU28 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CTAGE9A4FU28 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CTAGE9A4FU28 C2-209ENST00000452323 1999 ntTSL 2 BASIC15.16■□□□□ 0.02
CTAGE9A4FU28 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CTAGE9A4FU28 MAP7D2-202ENST00000379651 3930 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CTAGE9A4FU28 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CTAGE9A4FU28 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC15.16■□□□□ 0.02
CTAGE9A4FU28 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
CTAGE9A4FU28 LILRB1-203ENST00000396317 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CTAGE9A4FU28 TMOD1-201ENST00000259365 3343 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CTAGE9A4FU28 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
CTAGE9A4FU28 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CTAGE9A4FU28 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC15.16■□□□□ 0.02
CTAGE9A4FU28 DYRK4-201ENST00000010132 1840 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
CTAGE9A4FU28 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CTAGE9A4FU28 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CTAGE9A4FU28 RAC2-204ENST00000406508 893 ntTSL 5 BASIC15.16■□□□□ 0.02
CTAGE9A4FU28 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC15.16■□□□□ 0.02
CTAGE9A4FU28 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC15.16■□□□□ 0.02
CTAGE9A4FU28 CICP12-201ENST00000455801 843 ntBASIC15.16■□□□□ 0.02
CTAGE9A4FU28 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CTAGE9A4FU28 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC15.16■□□□□ 0.02
CTAGE9A4FU28 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CTAGE9A4FU28 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC15.16■□□□□ 0.02
CTAGE9A4FU28 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC15.16■□□□□ 0.02
CTAGE9A4FU28 RN7SL48P-201ENST00000579283 293 ntBASIC15.16■□□□□ 0.02
CTAGE9A4FU28 AC009955.4-201ENST00000597192 544 ntBASIC15.16■□□□□ 0.02
CTAGE9A4FU28 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC15.16■□□□□ 0.02
CTAGE9A4FU28 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC15.16■□□□□ 0.02
CTAGE9A4FU28 ZNF410-201ENST00000324593 2293 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CTAGE9A4FU28 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CTAGE9A4FU28 AC020917.4-201ENST00000623994 1999 ntBASIC15.16■□□□□ 0.02
CTAGE9A4FU28 AL390066.1-201ENST00000456414 2302 ntTSL 2 BASIC15.16■□□□□ 0.02
CTAGE9A4FU28 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC15.16■□□□□ 0.02
CTAGE9A4FU28 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CTAGE9A4FU28 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC15.16■□□□□ 0.02
CTAGE9A4FU28 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC15.16■□□□□ 0.02
CTAGE9A4FU28 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CTAGE9A4FU28 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CTAGE9A4FU28 ADRA2B-201ENST00000620793 3371 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
CTAGE9A4FU28 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CTAGE9A4FU28 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CTAGE9A4FU28 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CTAGE9A4FU28 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CTAGE9A4FU28 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CTAGE9A4FU28 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CTAGE9A4FU28 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CTAGE9A4FU28 LINC00638-201ENST00000555578 2518 ntBASIC15.15■□□□□ 0.02
CTAGE9A4FU28 CDK5RAP1-203ENST00000357886 2164 ntTSL 5 BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms