Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
CTDP1Q9Y5B0 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC16.37■□□□□ 0.21
CTDP1Q9Y5B0 ARSD-202ENST00000381154 5159 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CTDP1Q9Y5B0 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC16.37■□□□□ 0.21
CTDP1Q9Y5B0 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC16.37■□□□□ 0.21
CTDP1Q9Y5B0 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CTDP1Q9Y5B0 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
CTDP1Q9Y5B0 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
CTDP1Q9Y5B0 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC16.37■□□□□ 0.21
CTDP1Q9Y5B0 AC007952.5-201ENST00000572818 1486 ntBASIC16.37■□□□□ 0.21
CTDP1Q9Y5B0 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC16.37■□□□□ 0.21
CTDP1Q9Y5B0 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CTDP1Q9Y5B0 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CTDP1Q9Y5B0 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC16.37■□□□□ 0.21
CTDP1Q9Y5B0 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CTDP1Q9Y5B0 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC16.37■□□□□ 0.21
CTDP1Q9Y5B0 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CTDP1Q9Y5B0 RGS5-216ENST00000449680 788 ntTSL 3 BASIC16.37■□□□□ 0.21
CTDP1Q9Y5B0 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC16.37■□□□□ 0.21
CTDP1Q9Y5B0 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CTDP1Q9Y5B0 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC16.37■□□□□ 0.21
CTDP1Q9Y5B0 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC16.37■□□□□ 0.21
CTDP1Q9Y5B0 GAS7-216ENST00000583882 553 ntTSL 5 BASIC16.37■□□□□ 0.21
CTDP1Q9Y5B0 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC16.37■□□□□ 0.21
CTDP1Q9Y5B0 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CTDP1Q9Y5B0 AL132780.4-201ENST00000624870 1135 ntBASIC16.37■□□□□ 0.21
CTDP1Q9Y5B0 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC16.37■□□□□ 0.21
CTDP1Q9Y5B0 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CTDP1Q9Y5B0 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CTDP1Q9Y5B0 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CTDP1Q9Y5B0 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC16.37■□□□□ 0.21
CTDP1Q9Y5B0 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC16.37■□□□□ 0.21
CTDP1Q9Y5B0 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CTDP1Q9Y5B0 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
CTDP1Q9Y5B0 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CTDP1Q9Y5B0 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC16.37■□□□□ 0.21
CTDP1Q9Y5B0 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
CTDP1Q9Y5B0 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
CTDP1Q9Y5B0 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
CTDP1Q9Y5B0 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CTDP1Q9Y5B0 UNC13B-206ENST00000617908 6432 ntTSL 5 BASIC16.37■□□□□ 0.21
CTDP1Q9Y5B0 UNC13B-207ENST00000619578 6426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CTDP1Q9Y5B0 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CTDP1Q9Y5B0 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CTDP1Q9Y5B0 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC16.37■□□□□ 0.21
CTDP1Q9Y5B0 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CTDP1Q9Y5B0 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CTDP1Q9Y5B0 HPD-204ENST00000543163 1709 ntTSL 5 BASIC16.36■□□□□ 0.21
CTDP1Q9Y5B0 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CTDP1Q9Y5B0 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CTDP1Q9Y5B0 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CTDP1Q9Y5B0 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16.36■□□□□ 0.21
CTDP1Q9Y5B0 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CTDP1Q9Y5B0 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CTDP1Q9Y5B0 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC16.36■□□□□ 0.21
CTDP1Q9Y5B0 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CTDP1Q9Y5B0 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC16.36■□□□□ 0.21
CTDP1Q9Y5B0 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC16.36■□□□□ 0.21
CTDP1Q9Y5B0 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CTDP1Q9Y5B0 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
CTDP1Q9Y5B0 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
CTDP1Q9Y5B0 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC16.36■□□□□ 0.21
CTDP1Q9Y5B0 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CTDP1Q9Y5B0 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC16.36■□□□□ 0.21
CTDP1Q9Y5B0 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CTDP1Q9Y5B0 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC16.36■□□□□ 0.21
CTDP1Q9Y5B0 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC16.36■□□□□ 0.21
CTDP1Q9Y5B0 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CTDP1Q9Y5B0 USP17L6P-201ENST00000382470 1197 ntBASIC16.36■□□□□ 0.21
CTDP1Q9Y5B0 HMGA1P1-201ENST00000415560 1062 ntBASIC16.36■□□□□ 0.21
CTDP1Q9Y5B0 PIN4P1-201ENST00000451079 396 ntBASIC16.36■□□□□ 0.21
CTDP1Q9Y5B0 RN7SL767P-201ENST00000493013 295 ntBASIC16.36■□□□□ 0.21
CTDP1Q9Y5B0 SLC25A15P3-201ENST00000505530 290 ntBASIC16.36■□□□□ 0.21
CTDP1Q9Y5B0 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
CTDP1Q9Y5B0 HINT1-205ENST00000508488 703 ntTSL 2 BASIC16.36■□□□□ 0.21
CTDP1Q9Y5B0 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CTDP1Q9Y5B0 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CTDP1Q9Y5B0 TMCO5B-205ENST00000530020 894 ntBASIC16.36■□□□□ 0.21
CTDP1Q9Y5B0 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC16.36■□□□□ 0.21
CTDP1Q9Y5B0 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
CTDP1Q9Y5B0 RN7SL357P-201ENST00000581065 298 ntBASIC16.36■□□□□ 0.21
CTDP1Q9Y5B0 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC16.36■□□□□ 0.21
CTDP1Q9Y5B0 AC140113.1-201ENST00000603467 169 ntBASIC16.36■□□□□ 0.21
CTDP1Q9Y5B0 HLA-C-210ENST00000640219 976 ntBASIC16.36■□□□□ 0.21
CTDP1Q9Y5B0 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CTDP1Q9Y5B0 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CTDP1Q9Y5B0 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
CTDP1Q9Y5B0 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
CTDP1Q9Y5B0 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CTDP1Q9Y5B0 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC16.36■□□□□ 0.21
CTDP1Q9Y5B0 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CTDP1Q9Y5B0 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CTDP1Q9Y5B0 AC090505.1-201ENST00000430515 1834 ntBASIC16.35■□□□□ 0.21
CTDP1Q9Y5B0 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CTDP1Q9Y5B0 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CTDP1Q9Y5B0 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CTDP1Q9Y5B0 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CTDP1Q9Y5B0 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC16.35■□□□□ 0.21
CTDP1Q9Y5B0 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
CTDP1Q9Y5B0 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms