Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
NPIPA1Q9UND3 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NPIPA1Q9UND3 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
NPIPA1Q9UND3 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NPIPA1Q9UND3 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NPIPA1Q9UND3 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC13.13□□□□□ -0.31
NPIPA1Q9UND3 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
NPIPA1Q9UND3 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NPIPA1Q9UND3 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC13.13□□□□□ -0.31
NPIPA1Q9UND3 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC13.13□□□□□ -0.31
NPIPA1Q9UND3 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NPIPA1Q9UND3 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NPIPA1Q9UND3 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
NPIPA1Q9UND3 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.13□□□□□ -0.31
NPIPA1Q9UND3 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC13.13□□□□□ -0.31
NPIPA1Q9UND3 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NPIPA1Q9UND3 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NPIPA1Q9UND3 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
NPIPA1Q9UND3 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NPIPA1Q9UND3 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.13□□□□□ -0.31
NPIPA1Q9UND3 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
NPIPA1Q9UND3 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
NPIPA1Q9UND3 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NPIPA1Q9UND3 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
NPIPA1Q9UND3 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NPIPA1Q9UND3 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NPIPA1Q9UND3 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NPIPA1Q9UND3 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NPIPA1Q9UND3 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
NPIPA1Q9UND3 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NPIPA1Q9UND3 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NPIPA1Q9UND3 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NPIPA1Q9UND3 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC13.13□□□□□ -0.31
NPIPA1Q9UND3 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC13.13□□□□□ -0.31
NPIPA1Q9UND3 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NPIPA1Q9UND3 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NPIPA1Q9UND3 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
NPIPA1Q9UND3 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NPIPA1Q9UND3 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC13.13□□□□□ -0.31
NPIPA1Q9UND3 RPS9P1-201ENST00000419943 583 ntBASIC13.13□□□□□ -0.31
NPIPA1Q9UND3 HPGD-203ENST00000422112 805 ntTSL 2 BASIC13.13□□□□□ -0.31
NPIPA1Q9UND3 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC13.13□□□□□ -0.31
NPIPA1Q9UND3 DNAJB1P1-201ENST00000429417 1024 ntBASIC13.13□□□□□ -0.31
NPIPA1Q9UND3 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC13.13□□□□□ -0.31
NPIPA1Q9UND3 OR2R1P-201ENST00000441404 914 ntBASIC13.13□□□□□ -0.31
NPIPA1Q9UND3 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC13.13□□□□□ -0.31
NPIPA1Q9UND3 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NPIPA1Q9UND3 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
NPIPA1Q9UND3 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NPIPA1Q9UND3 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NPIPA1Q9UND3 AC003686.1-201ENST00000550956 1034 ntBASIC13.13□□□□□ -0.31
NPIPA1Q9UND3 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC13.13□□□□□ -0.31
NPIPA1Q9UND3 HPN-206ENST00000597419 1212 ntTSL 5 BASIC13.13□□□□□ -0.31
NPIPA1Q9UND3 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC13.13□□□□□ -0.31
NPIPA1Q9UND3 AC092171.5-201ENST00000608012 942 ntBASIC13.13□□□□□ -0.31
NPIPA1Q9UND3 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC13.13□□□□□ -0.31
NPIPA1Q9UND3 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC13.13□□□□□ -0.31
NPIPA1Q9UND3 AC011491.1-203ENST00000637688 543 ntBASIC13.13□□□□□ -0.31
NPIPA1Q9UND3 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NPIPA1Q9UND3 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
NPIPA1Q9UND3 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NPIPA1Q9UND3 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NPIPA1Q9UND3 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
NPIPA1Q9UND3 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC13.13□□□□□ -0.31
NPIPA1Q9UND3 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
NPIPA1Q9UND3 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC13.13□□□□□ -0.31
NPIPA1Q9UND3 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC13.13□□□□□ -0.31
NPIPA1Q9UND3 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NPIPA1Q9UND3 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC13.13□□□□□ -0.31
NPIPA1Q9UND3 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
NPIPA1Q9UND3 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NPIPA1Q9UND3 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NPIPA1Q9UND3 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NPIPA1Q9UND3 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NPIPA1Q9UND3 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NPIPA1Q9UND3 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NPIPA1Q9UND3 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
NPIPA1Q9UND3 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC13.13□□□□□ -0.31
NPIPA1Q9UND3 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
NPIPA1Q9UND3 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC13.12□□□□□ -0.31
NPIPA1Q9UND3 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
NPIPA1Q9UND3 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NPIPA1Q9UND3 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
NPIPA1Q9UND3 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
NPIPA1Q9UND3 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
NPIPA1Q9UND3 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NPIPA1Q9UND3 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC13.12□□□□□ -0.31
NPIPA1Q9UND3 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
NPIPA1Q9UND3 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NPIPA1Q9UND3 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
NPIPA1Q9UND3 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NPIPA1Q9UND3 AC020910.6-201ENST00000623084 1459 ntBASIC13.12□□□□□ -0.31
NPIPA1Q9UND3 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
NPIPA1Q9UND3 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NPIPA1Q9UND3 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NPIPA1Q9UND3 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC13.12□□□□□ -0.31
NPIPA1Q9UND3 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
NPIPA1Q9UND3 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
NPIPA1Q9UND3 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
NPIPA1Q9UND3 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms