Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
DUX4Q9UBX2 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
DUX4Q9UBX2 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC12.6□□□□□ -0.39
DUX4Q9UBX2 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
DUX4Q9UBX2 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
DUX4Q9UBX2 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
DUX4Q9UBX2 USB1-202ENST00000423271 1217 ntTSL 2 BASIC12.6□□□□□ -0.39
DUX4Q9UBX2 FAM197Y7-201ENST00000432892 766 ntBASIC12.6□□□□□ -0.39
DUX4Q9UBX2 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC12.6□□□□□ -0.39
DUX4Q9UBX2 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC12.6□□□□□ -0.39
DUX4Q9UBX2 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
DUX4Q9UBX2 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC12.6□□□□□ -0.39
DUX4Q9UBX2 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC12.6□□□□□ -0.39
DUX4Q9UBX2 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
DUX4Q9UBX2 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC12.6□□□□□ -0.39
DUX4Q9UBX2 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC12.6□□□□□ -0.39
DUX4Q9UBX2 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC12.6□□□□□ -0.39
DUX4Q9UBX2 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC12.6□□□□□ -0.39
DUX4Q9UBX2 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC12.6□□□□□ -0.39
DUX4Q9UBX2 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC12.6□□□□□ -0.39
DUX4Q9UBX2 AC025279.2-201ENST00000569730 653 ntBASIC12.6□□□□□ -0.39
DUX4Q9UBX2 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC12.6□□□□□ -0.39
DUX4Q9UBX2 AL512343.1-201ENST00000605837 169 ntBASIC12.6□□□□□ -0.39
DUX4Q9UBX2 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
DUX4Q9UBX2 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
DUX4Q9UBX2 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
DUX4Q9UBX2 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
DUX4Q9UBX2 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC12.6□□□□□ -0.39
DUX4Q9UBX2 PDIA3P1-201ENST00000471856 1510 ntBASIC12.6□□□□□ -0.39
DUX4Q9UBX2 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
DUX4Q9UBX2 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC12.6□□□□□ -0.39
DUX4Q9UBX2 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
DUX4Q9UBX2 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC12.6□□□□□ -0.39
DUX4Q9UBX2 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC12.6□□□□□ -0.39
DUX4Q9UBX2 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
DUX4Q9UBX2 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC12.6□□□□□ -0.39
DUX4Q9UBX2 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC12.6□□□□□ -0.39
DUX4Q9UBX2 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
DUX4Q9UBX2 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
DUX4Q9UBX2 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
DUX4Q9UBX2 NMNAT2-201ENST00000287713 5663 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
DUX4Q9UBX2 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
DUX4Q9UBX2 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
DUX4Q9UBX2 AC018442.1-201ENST00000421439 2061 ntBASIC12.6□□□□□ -0.39
DUX4Q9UBX2 SLC9A3P3-201ENST00000457608 2229 ntBASIC12.6□□□□□ -0.39
DUX4Q9UBX2 PIAS2-201ENST00000324794 4543 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
DUX4Q9UBX2 COX18-201ENST00000295890 6846 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
DUX4Q9UBX2 TMEM56-201ENST00000370203 6822 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
DUX4Q9UBX2 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
DUX4Q9UBX2 ZNF831-203ENST00000637017 10953 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
DUX4Q9UBX2 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC12.59□□□□□ -0.39
DUX4Q9UBX2 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
DUX4Q9UBX2 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
DUX4Q9UBX2 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC12.59□□□□□ -0.39
DUX4Q9UBX2 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
DUX4Q9UBX2 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
DUX4Q9UBX2 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
DUX4Q9UBX2 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
DUX4Q9UBX2 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC12.59□□□□□ -0.39
DUX4Q9UBX2 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
DUX4Q9UBX2 RGS12-201ENST00000336727 4674 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
DUX4Q9UBX2 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
DUX4Q9UBX2 TCAM1P-207ENST00000485295 1537 ntBASIC12.59□□□□□ -0.39
DUX4Q9UBX2 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
DUX4Q9UBX2 MXRA5Y-201ENST00000420610 8000 ntBASIC12.59□□□□□ -0.39
DUX4Q9UBX2 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC12.59□□□□□ -0.39
DUX4Q9UBX2 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
DUX4Q9UBX2 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
DUX4Q9UBX2 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
DUX4Q9UBX2 FO681548.1-201ENST00000455617 1132 ntBASIC12.59□□□□□ -0.39
DUX4Q9UBX2 AC007551.1-201ENST00000457394 519 ntBASIC12.59□□□□□ -0.39
DUX4Q9UBX2 ACA64.2-201ENST00000459014 129 ntBASIC12.59□□□□□ -0.39
DUX4Q9UBX2 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC12.59□□□□□ -0.39
DUX4Q9UBX2 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
DUX4Q9UBX2 RAB43P1-201ENST00000561790 589 ntBASIC12.59□□□□□ -0.39
DUX4Q9UBX2 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC12.59□□□□□ -0.39
DUX4Q9UBX2 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC12.59□□□□□ -0.39
DUX4Q9UBX2 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC12.59□□□□□ -0.39
DUX4Q9UBX2 AL162274.1-201ENST00000617191 1098 ntBASIC12.59□□□□□ -0.39
DUX4Q9UBX2 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
DUX4Q9UBX2 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC12.59□□□□□ -0.39
DUX4Q9UBX2 PCDHB18P-202ENST00000526308 3197 ntBASIC12.59□□□□□ -0.39
DUX4Q9UBX2 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
DUX4Q9UBX2 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC12.59□□□□□ -0.39
DUX4Q9UBX2 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
DUX4Q9UBX2 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
DUX4Q9UBX2 RBM19-201ENST00000261741 4194 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
DUX4Q9UBX2 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
DUX4Q9UBX2 EIF2AK1-201ENST00000199389 4469 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
DUX4Q9UBX2 CETP-203ENST00000566128 1733 ntTSL 5 BASIC12.59□□□□□ -0.39
DUX4Q9UBX2 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
DUX4Q9UBX2 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
DUX4Q9UBX2 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
DUX4Q9UBX2 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC12.59□□□□□ -0.39
DUX4Q9UBX2 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC12.59□□□□□ -0.39
DUX4Q9UBX2 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
DUX4Q9UBX2 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
DUX4Q9UBX2 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
DUX4Q9UBX2 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC12.58□□□□□ -0.39
DUX4Q9UBX2 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC12.58□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms