Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HMG20BQ9P0W2 KRT8P18-201ENST00000413425 1445 ntBASIC17.17■□□□□ 0.34
HMG20BQ9P0W2 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HMG20BQ9P0W2 AC098934.1-203ENST00000442868 1262 ntBASIC17.17■□□□□ 0.34
HMG20BQ9P0W2 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC17.17■□□□□ 0.34
HMG20BQ9P0W2 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HMG20BQ9P0W2 TMCO5B-205ENST00000530020 894 ntBASIC17.17■□□□□ 0.34
HMG20BQ9P0W2 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC17.17■□□□□ 0.34
HMG20BQ9P0W2 AC023794.5-201ENST00000564380 2157 ntBASIC17.17■□□□□ 0.34
HMG20BQ9P0W2 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC17.17■□□□□ 0.34
HMG20BQ9P0W2 MIR2392-201ENST00000584881 84 ntBASIC17.17■□□□□ 0.34
HMG20BQ9P0W2 TP53-221ENST00000615910 1149 ntTSL 5 BASIC17.17■□□□□ 0.34
HMG20BQ9P0W2 SNX1-214ENST00000625244 324 ntTSL 5 BASIC17.17■□□□□ 0.34
HMG20BQ9P0W2 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HMG20BQ9P0W2 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
HMG20BQ9P0W2 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC17.17■□□□□ 0.34
HMG20BQ9P0W2 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HMG20BQ9P0W2 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
HMG20BQ9P0W2 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
HMG20BQ9P0W2 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HMG20BQ9P0W2 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC17.17■□□□□ 0.34
HMG20BQ9P0W2 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HMG20BQ9P0W2 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC17.17■□□□□ 0.34
HMG20BQ9P0W2 KRT8P43-201ENST00000406052 1458 ntBASIC17.17■□□□□ 0.34
HMG20BQ9P0W2 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
HMG20BQ9P0W2 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
HMG20BQ9P0W2 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
HMG20BQ9P0W2 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HMG20BQ9P0W2 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC17.17■□□□□ 0.34
HMG20BQ9P0W2 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HMG20BQ9P0W2 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HMG20BQ9P0W2 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
HMG20BQ9P0W2 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HMG20BQ9P0W2 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HMG20BQ9P0W2 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HMG20BQ9P0W2 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HMG20BQ9P0W2 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC17.16■□□□□ 0.34
HMG20BQ9P0W2 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HMG20BQ9P0W2 DUT-208ENST00000559540 1441 ntTSL 2 BASIC17.16■□□□□ 0.34
HMG20BQ9P0W2 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HMG20BQ9P0W2 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HMG20BQ9P0W2 PYY2-201ENST00000315776 282 ntBASIC17.16■□□□□ 0.34
HMG20BQ9P0W2 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
HMG20BQ9P0W2 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
HMG20BQ9P0W2 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
HMG20BQ9P0W2 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HMG20BQ9P0W2 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC17.16■□□□□ 0.34
HMG20BQ9P0W2 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC17.16■□□□□ 0.34
HMG20BQ9P0W2 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC17.16■□□□□ 0.34
HMG20BQ9P0W2 AC018638.5-201ENST00000450885 754 ntBASIC17.16■□□□□ 0.34
HMG20BQ9P0W2 SLC25A15P3-201ENST00000505530 290 ntBASIC17.16■□□□□ 0.34
HMG20BQ9P0W2 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
HMG20BQ9P0W2 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
HMG20BQ9P0W2 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
HMG20BQ9P0W2 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC17.16■□□□□ 0.34
HMG20BQ9P0W2 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC17.16■□□□□ 0.34
HMG20BQ9P0W2 MIR3180-2-201ENST00000581748 88 ntBASIC17.16■□□□□ 0.34
HMG20BQ9P0W2 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HMG20BQ9P0W2 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HMG20BQ9P0W2 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HMG20BQ9P0W2 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC17.16■□□□□ 0.34
HMG20BQ9P0W2 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
HMG20BQ9P0W2 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
HMG20BQ9P0W2 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HMG20BQ9P0W2 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
HMG20BQ9P0W2 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HMG20BQ9P0W2 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
HMG20BQ9P0W2 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HMG20BQ9P0W2 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC17.16■□□□□ 0.34
HMG20BQ9P0W2 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HMG20BQ9P0W2 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HMG20BQ9P0W2 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HMG20BQ9P0W2 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HMG20BQ9P0W2 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC17.16■□□□□ 0.34
HMG20BQ9P0W2 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
HMG20BQ9P0W2 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
HMG20BQ9P0W2 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HMG20BQ9P0W2 LINC02486-201ENST00000604157 3000 ntBASIC17.15■□□□□ 0.34
HMG20BQ9P0W2 FTX-216ENST00000638985 1367 ntTSL 5 BASIC17.15■□□□□ 0.34
HMG20BQ9P0W2 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
HMG20BQ9P0W2 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
HMG20BQ9P0W2 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC17.15■□□□□ 0.34
HMG20BQ9P0W2 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
HMG20BQ9P0W2 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HMG20BQ9P0W2 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HMG20BQ9P0W2 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HMG20BQ9P0W2 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
HMG20BQ9P0W2 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC17.15■□□□□ 0.34
HMG20BQ9P0W2 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HMG20BQ9P0W2 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC17.15■□□□□ 0.34
HMG20BQ9P0W2 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC17.15■□□□□ 0.34
HMG20BQ9P0W2 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HMG20BQ9P0W2 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HMG20BQ9P0W2 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC17.15■□□□□ 0.34
HMG20BQ9P0W2 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC17.15■□□□□ 0.34
HMG20BQ9P0W2 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC17.15■□□□□ 0.34
HMG20BQ9P0W2 HIST2H2BA-201ENST00000412169 381 ntBASIC17.15■□□□□ 0.34
HMG20BQ9P0W2 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC17.15■□□□□ 0.34
HMG20BQ9P0W2 SCARNA12-201ENST00000459155 270 ntBASIC17.15■□□□□ 0.34
HMG20BQ9P0W2 RN7SL788P-201ENST00000460504 316 ntBASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms