Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC15.82■□□□□ 0.12
ATP6V0A1Q93050 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ATP6V0A1Q93050 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
ATP6V0A1Q93050 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.81■□□□□ 0.12
ATP6V0A1Q93050 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ATP6V0A1Q93050 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATP6V0A1Q93050 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATP6V0A1Q93050 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATP6V0A1Q93050 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATP6V0A1Q93050 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATP6V0A1Q93050 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
ATP6V0A1Q93050 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
ATP6V0A1Q93050 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATP6V0A1Q93050 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
ATP6V0A1Q93050 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATP6V0A1Q93050 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC15.81■□□□□ 0.12
ATP6V0A1Q93050 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATP6V0A1Q93050 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC15.81■□□□□ 0.12
ATP6V0A1Q93050 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATP6V0A1Q93050 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATP6V0A1Q93050 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC15.81■□□□□ 0.12
ATP6V0A1Q93050 HSPA7-201ENST00000445535 1927 ntBASIC15.81■□□□□ 0.12
ATP6V0A1Q93050 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC15.81■□□□□ 0.12
ATP6V0A1Q93050 AC018638.5-201ENST00000450885 754 ntBASIC15.81■□□□□ 0.12
ATP6V0A1Q93050 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC15.81■□□□□ 0.12
ATP6V0A1Q93050 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC15.81■□□□□ 0.12
ATP6V0A1Q93050 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC15.81■□□□□ 0.12
ATP6V0A1Q93050 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC15.81■□□□□ 0.12
ATP6V0A1Q93050 CICP16-201ENST00000502609 2813 ntBASIC15.81■□□□□ 0.12
ATP6V0A1Q93050 SLC25A15P3-201ENST00000505530 290 ntBASIC15.81■□□□□ 0.12
ATP6V0A1Q93050 RPS23-204ENST00000507980 836 ntTSL 2 BASIC15.81■□□□□ 0.12
ATP6V0A1Q93050 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC15.81■□□□□ 0.12
ATP6V0A1Q93050 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC15.81■□□□□ 0.12
ATP6V0A1Q93050 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC15.81■□□□□ 0.12
ATP6V0A1Q93050 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
ATP6V0A1Q93050 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC15.81■□□□□ 0.12
ATP6V0A1Q93050 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC15.81■□□□□ 0.12
ATP6V0A1Q93050 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ATP6V0A1Q93050 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.81■□□□□ 0.12
ATP6V0A1Q93050 TP53-221ENST00000615910 1149 ntTSL 5 BASIC15.81■□□□□ 0.12
ATP6V0A1Q93050 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.81■□□□□ 0.12
ATP6V0A1Q93050 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC15.81■□□□□ 0.12
ATP6V0A1Q93050 FTX-216ENST00000638985 1367 ntTSL 5 BASIC15.81■□□□□ 0.12
ATP6V0A1Q93050 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATP6V0A1Q93050 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC15.81■□□□□ 0.12
ATP6V0A1Q93050 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATP6V0A1Q93050 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATP6V0A1Q93050 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATP6V0A1Q93050 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ATP6V0A1Q93050 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATP6V0A1Q93050 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATP6V0A1Q93050 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC15.8■□□□□ 0.12
ATP6V0A1Q93050 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATP6V0A1Q93050 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATP6V0A1Q93050 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC15.8■□□□□ 0.12
ATP6V0A1Q93050 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC15.8■□□□□ 0.12
ATP6V0A1Q93050 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATP6V0A1Q93050 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ATP6V0A1Q93050 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATP6V0A1Q93050 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC15.8■□□□□ 0.12
ATP6V0A1Q93050 AL139158.3-201ENST00000641212 1562 ntBASIC15.8■□□□□ 0.12
ATP6V0A1Q93050 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
ATP6V0A1Q93050 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
ATP6V0A1Q93050 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC15.8■□□□□ 0.12
ATP6V0A1Q93050 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
ATP6V0A1Q93050 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATP6V0A1Q93050 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
ATP6V0A1Q93050 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC15.8■□□□□ 0.12
ATP6V0A1Q93050 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC15.8■□□□□ 0.12
ATP6V0A1Q93050 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.8■□□□□ 0.12
ATP6V0A1Q93050 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATP6V0A1Q93050 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATP6V0A1Q93050 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATP6V0A1Q93050 LINC00265-2P-201ENST00000413372 782 ntBASIC15.8■□□□□ 0.12
ATP6V0A1Q93050 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC15.8■□□□□ 0.12
ATP6V0A1Q93050 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC15.8■□□□□ 0.12
ATP6V0A1Q93050 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC15.8■□□□□ 0.12
ATP6V0A1Q93050 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ATP6V0A1Q93050 RN7SL455P-201ENST00000580629 282 ntBASIC15.8■□□□□ 0.12
ATP6V0A1Q93050 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC15.8■□□□□ 0.12
ATP6V0A1Q93050 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC15.8■□□□□ 0.12
ATP6V0A1Q93050 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
ATP6V0A1Q93050 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ATP6V0A1Q93050 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATP6V0A1Q93050 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATP6V0A1Q93050 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
ATP6V0A1Q93050 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC15.8■□□□□ 0.12
ATP6V0A1Q93050 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATP6V0A1Q93050 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC15.8■□□□□ 0.12
ATP6V0A1Q93050 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC15.8■□□□□ 0.12
ATP6V0A1Q93050 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATP6V0A1Q93050 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATP6V0A1Q93050 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ATP6V0A1Q93050 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC15.8■□□□□ 0.12
ATP6V0A1Q93050 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC15.8■□□□□ 0.12
ATP6V0A1Q93050 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
ATP6V0A1Q93050 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC15.8■□□□□ 0.12
ATP6V0A1Q93050 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ATP6V0A1Q93050 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ATP6V0A1Q93050 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms