Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC15.06■□□□□ 0
LMO3Q8TAP4 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
LMO3Q8TAP4 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC15.06■□□□□ 0
LMO3Q8TAP4 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC15.06■□□□□ 0
LMO3Q8TAP4 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
LMO3Q8TAP4 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC15.06■□□□□ 0
LMO3Q8TAP4 PPP1R26P4-201ENST00000619065 3527 ntBASIC15.06■□□□□ 0
LMO3Q8TAP4 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
LMO3Q8TAP4 TBC1D27-202ENST00000424239 1573 ntBASIC15.06■□□□□ 0
LMO3Q8TAP4 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC15.06■□□□□ 0
LMO3Q8TAP4 NRADDP-202ENST00000641269 1585 ntBASIC15.06■□□□□ 0
LMO3Q8TAP4 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC15.06■□□□□ 0
LMO3Q8TAP4 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC15.06■□□□□ 0
LMO3Q8TAP4 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.06■□□□□ 0
LMO3Q8TAP4 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LMO3Q8TAP4 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC15.06■□□□□ 0
LMO3Q8TAP4 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LMO3Q8TAP4 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
LMO3Q8TAP4 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LMO3Q8TAP4 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.05■□□□□ 0
LMO3Q8TAP4 AL137784.3-201ENST00000623858 2288 ntBASIC15.05■□□□□ 0
LMO3Q8TAP4 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
LMO3Q8TAP4 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC15.05■□□□□ 0
LMO3Q8TAP4 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
LMO3Q8TAP4 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
LMO3Q8TAP4 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC15.05■□□□□ -0
LMO3Q8TAP4 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
LMO3Q8TAP4 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
LMO3Q8TAP4 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
LMO3Q8TAP4 LINC00265-2P-201ENST00000413372 782 ntBASIC15.05■□□□□ -0
LMO3Q8TAP4 DNAJB1P1-201ENST00000429417 1024 ntBASIC15.05■□□□□ -0
LMO3Q8TAP4 AC026320.2-201ENST00000434379 478 ntBASIC15.05■□□□□ -0
LMO3Q8TAP4 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC15.05■□□□□ -0
LMO3Q8TAP4 AC012618.1-201ENST00000461223 412 ntBASIC15.05■□□□□ -0
LMO3Q8TAP4 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
LMO3Q8TAP4 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
LMO3Q8TAP4 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC15.05■□□□□ -0
LMO3Q8TAP4 STUB1-204ENST00000564370 875 ntTSL 2 BASIC15.05■□□□□ -0
LMO3Q8TAP4 MIR4525-201ENST00000580000 75 ntBASIC15.05■□□□□ -0
LMO3Q8TAP4 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC15.05■□□□□ -0
LMO3Q8TAP4 CDK7-214ENST00000626796 358 ntTSL 5 BASIC15.05■□□□□ -0
LMO3Q8TAP4 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC15.05■□□□□ -0
LMO3Q8TAP4 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC15.05■□□□□ -0
LMO3Q8TAP4 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
LMO3Q8TAP4 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC15.05■□□□□ -0
LMO3Q8TAP4 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LMO3Q8TAP4 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
LMO3Q8TAP4 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
LMO3Q8TAP4 AC245140.2-201ENST00000624054 1939 ntBASIC15.05■□□□□ -0
LMO3Q8TAP4 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
LMO3Q8TAP4 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC15.05■□□□□ -0
LMO3Q8TAP4 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC15.05■□□□□ -0
LMO3Q8TAP4 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC15.05■□□□□ -0
LMO3Q8TAP4 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
LMO3Q8TAP4 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LMO3Q8TAP4 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC15.05■□□□□ -0
LMO3Q8TAP4 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
LMO3Q8TAP4 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LMO3Q8TAP4 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
LMO3Q8TAP4 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LMO3Q8TAP4 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LMO3Q8TAP4 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LMO3Q8TAP4 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC15.04■□□□□ -0
LMO3Q8TAP4 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
LMO3Q8TAP4 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
LMO3Q8TAP4 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LMO3Q8TAP4 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LMO3Q8TAP4 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LMO3Q8TAP4 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LMO3Q8TAP4 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC15.04■□□□□ -0
LMO3Q8TAP4 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
LMO3Q8TAP4 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
LMO3Q8TAP4 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC15.04■□□□□ -0
LMO3Q8TAP4 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
LMO3Q8TAP4 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC15.04■□□□□ -0
LMO3Q8TAP4 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LMO3Q8TAP4 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC15.04■□□□□ -0
LMO3Q8TAP4 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC15.04■□□□□ -0
LMO3Q8TAP4 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC15.04■□□□□ -0
LMO3Q8TAP4 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC15.04■□□□□ -0
LMO3Q8TAP4 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC15.04■□□□□ -0
LMO3Q8TAP4 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LMO3Q8TAP4 OR2K2-202ENST00000374428 1038 ntBASIC15.04■□□□□ -0
LMO3Q8TAP4 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LMO3Q8TAP4 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
LMO3Q8TAP4 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC15.04■□□□□ -0
LMO3Q8TAP4 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC15.04■□□□□ -0
LMO3Q8TAP4 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC15.04■□□□□ -0
LMO3Q8TAP4 CALR4P-201ENST00000431943 946 ntBASIC15.04■□□□□ -0
LMO3Q8TAP4 HNRNPA1P2-207ENST00000432375 960 ntBASIC15.04■□□□□ -0
LMO3Q8TAP4 AC006335.1-201ENST00000445200 547 ntBASIC15.04■□□□□ -0
LMO3Q8TAP4 AC005077.2-201ENST00000449786 690 ntBASIC15.04■□□□□ -0
LMO3Q8TAP4 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC15.04■□□□□ -0
LMO3Q8TAP4 RN7SL11P-201ENST00000471305 293 ntBASIC15.04■□□□□ -0
LMO3Q8TAP4 TSACC-208ENST00000481479 741 ntTSL 2 BASIC15.04■□□□□ -0
LMO3Q8TAP4 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC15.04■□□□□ -0
LMO3Q8TAP4 MIR3619-201ENST00000579667 83 ntBASIC15.04■□□□□ -0
LMO3Q8TAP4 RN7SL574P-201ENST00000581512 297 ntBASIC15.04■□□□□ -0
LMO3Q8TAP4 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
LMO3Q8TAP4 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms