Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 LINC01783-202ENST00000614408 828 ntBASIC14.94□□□□□ -0.02
SCUBE3Q8IX30 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
SCUBE3Q8IX30 BX284668.2-205ENST00000619677 828 ntBASIC14.94□□□□□ -0.02
SCUBE3Q8IX30 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC14.94□□□□□ -0.02
SCUBE3Q8IX30 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SCUBE3Q8IX30 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
SCUBE3Q8IX30 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
SCUBE3Q8IX30 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SCUBE3Q8IX30 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
SCUBE3Q8IX30 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SCUBE3Q8IX30 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SCUBE3Q8IX30 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SCUBE3Q8IX30 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
SCUBE3Q8IX30 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
SCUBE3Q8IX30 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC14.94□□□□□ -0.02
SCUBE3Q8IX30 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.94□□□□□ -0.02
SCUBE3Q8IX30 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
SCUBE3Q8IX30 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SCUBE3Q8IX30 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
SCUBE3Q8IX30 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
SCUBE3Q8IX30 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SCUBE3Q8IX30 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SCUBE3Q8IX30 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SCUBE3Q8IX30 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
SCUBE3Q8IX30 AMT-256ENST00000638063 1783 ntTSL 5 BASIC14.93□□□□□ -0.02
SCUBE3Q8IX30 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.93□□□□□ -0.02
SCUBE3Q8IX30 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SCUBE3Q8IX30 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
SCUBE3Q8IX30 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC14.93□□□□□ -0.02
SCUBE3Q8IX30 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SCUBE3Q8IX30 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SCUBE3Q8IX30 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SCUBE3Q8IX30 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SCUBE3Q8IX30 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC14.93□□□□□ -0.02
SCUBE3Q8IX30 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SCUBE3Q8IX30 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SCUBE3Q8IX30 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SCUBE3Q8IX30 LRRIQ3-202ENST00000370909 793 ntTSL 5 BASIC14.93□□□□□ -0.02
SCUBE3Q8IX30 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SCUBE3Q8IX30 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SCUBE3Q8IX30 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
SCUBE3Q8IX30 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SCUBE3Q8IX30 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC14.93□□□□□ -0.02
SCUBE3Q8IX30 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC14.93□□□□□ -0.02
SCUBE3Q8IX30 NUP210P1-202ENST00000504322 710 ntBASIC14.93□□□□□ -0.02
SCUBE3Q8IX30 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC14.93□□□□□ -0.02
SCUBE3Q8IX30 AC026803.1-201ENST00000569130 274 ntBASIC14.93□□□□□ -0.02
SCUBE3Q8IX30 PHBP15-201ENST00000574228 665 ntBASIC14.93□□□□□ -0.02
SCUBE3Q8IX30 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
SCUBE3Q8IX30 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC14.93□□□□□ -0.02
SCUBE3Q8IX30 AP001442.1-203ENST00000596385 876 ntTSL 5 BASIC14.93□□□□□ -0.02
SCUBE3Q8IX30 SPCS2P2-201ENST00000603270 608 ntBASIC14.93□□□□□ -0.02
SCUBE3Q8IX30 AF254983.2-201ENST00000612331 135 ntBASIC14.93□□□□□ -0.02
SCUBE3Q8IX30 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC14.93□□□□□ -0.02
SCUBE3Q8IX30 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC14.93□□□□□ -0.02
SCUBE3Q8IX30 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SCUBE3Q8IX30 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SCUBE3Q8IX30 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SCUBE3Q8IX30 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC14.93□□□□□ -0.02
SCUBE3Q8IX30 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SCUBE3Q8IX30 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.93□□□□□ -0.02
SCUBE3Q8IX30 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SCUBE3Q8IX30 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
SCUBE3Q8IX30 AC007326.2-201ENST00000624224 7579 ntBASIC14.93□□□□□ -0.02
SCUBE3Q8IX30 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SCUBE3Q8IX30 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC14.93□□□□□ -0.02
SCUBE3Q8IX30 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SCUBE3Q8IX30 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
SCUBE3Q8IX30 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SCUBE3Q8IX30 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SCUBE3Q8IX30 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
SCUBE3Q8IX30 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
SCUBE3Q8IX30 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
SCUBE3Q8IX30 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SCUBE3Q8IX30 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.92□□□□□ -0.02
SCUBE3Q8IX30 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
SCUBE3Q8IX30 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC14.92□□□□□ -0.02
SCUBE3Q8IX30 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
SCUBE3Q8IX30 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SCUBE3Q8IX30 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SCUBE3Q8IX30 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SCUBE3Q8IX30 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SCUBE3Q8IX30 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC14.92□□□□□ -0.02
SCUBE3Q8IX30 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC14.92□□□□□ -0.02
SCUBE3Q8IX30 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SCUBE3Q8IX30 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
SCUBE3Q8IX30 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SCUBE3Q8IX30 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
SCUBE3Q8IX30 BAX-205ENST00000391871 687 ntTSL 5 BASIC14.92□□□□□ -0.02
SCUBE3Q8IX30 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SCUBE3Q8IX30 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC14.92□□□□□ -0.02
SCUBE3Q8IX30 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SCUBE3Q8IX30 AL357833.2-202ENST00000413757 372 ntTSL 3 BASIC14.92□□□□□ -0.02
SCUBE3Q8IX30 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC14.92□□□□□ -0.02
SCUBE3Q8IX30 AC026320.2-201ENST00000434379 478 ntBASIC14.92□□□□□ -0.02
SCUBE3Q8IX30 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC14.92□□□□□ -0.02
SCUBE3Q8IX30 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC14.92□□□□□ -0.02
SCUBE3Q8IX30 RPSAP15-201ENST00000448168 861 ntBASIC14.92□□□□□ -0.02
SCUBE3Q8IX30 AC008723.1-201ENST00000506922 207 ntBASIC14.92□□□□□ -0.02
SCUBE3Q8IX30 AC116345.2-201ENST00000512837 523 ntBASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms