Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RP1L1Q8IWN7 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
RP1L1Q8IWN7 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RP1L1Q8IWN7 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC12.9□□□□□ -0.34
RP1L1Q8IWN7 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RP1L1Q8IWN7 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC12.9□□□□□ -0.34
RP1L1Q8IWN7 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC12.9□□□□□ -0.34
RP1L1Q8IWN7 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
RP1L1Q8IWN7 DYNLT1-201ENST00000367085 774 ntTSL 2 BASIC12.9□□□□□ -0.34
RP1L1Q8IWN7 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
RP1L1Q8IWN7 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
RP1L1Q8IWN7 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
RP1L1Q8IWN7 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RP1L1Q8IWN7 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC12.9□□□□□ -0.34
RP1L1Q8IWN7 AL451000.1-201ENST00000451300 1186 ntBASIC12.9□□□□□ -0.34
RP1L1Q8IWN7 RN7SL23P-201ENST00000484055 275 ntBASIC12.9□□□□□ -0.34
RP1L1Q8IWN7 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC12.9□□□□□ -0.34
RP1L1Q8IWN7 AC090136.2-201ENST00000517809 420 ntBASIC12.9□□□□□ -0.34
RP1L1Q8IWN7 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC12.9□□□□□ -0.34
RP1L1Q8IWN7 VPS18-202ENST00000558474 873 ntTSL 3 BASIC12.9□□□□□ -0.34
RP1L1Q8IWN7 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC12.9□□□□□ -0.34
RP1L1Q8IWN7 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC12.9□□□□□ -0.34
RP1L1Q8IWN7 LINC02333-201ENST00000603464 852 ntTSL 3 BASIC12.9□□□□□ -0.34
RP1L1Q8IWN7 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
RP1L1Q8IWN7 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC12.9□□□□□ -0.34
RP1L1Q8IWN7 AGGF1P1-201ENST00000509500 2073 ntBASIC12.9□□□□□ -0.34
RP1L1Q8IWN7 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC12.9□□□□□ -0.34
RP1L1Q8IWN7 MRPL37P1-201ENST00000592451 1337 ntBASIC12.9□□□□□ -0.34
RP1L1Q8IWN7 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RP1L1Q8IWN7 KCNMA1-232ENST00000638306 3811 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
RP1L1Q8IWN7 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC12.9□□□□□ -0.34
RP1L1Q8IWN7 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RP1L1Q8IWN7 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC12.9□□□□□ -0.34
RP1L1Q8IWN7 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC12.9□□□□□ -0.34
RP1L1Q8IWN7 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RP1L1Q8IWN7 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
RP1L1Q8IWN7 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
RP1L1Q8IWN7 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
RP1L1Q8IWN7 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.35
RP1L1Q8IWN7 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC12.9□□□□□ -0.35
RP1L1Q8IWN7 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC12.9□□□□□ -0.35
RP1L1Q8IWN7 KCNMA1-285ENST00000640605 3864 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.35
RP1L1Q8IWN7 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC12.9□□□□□ -0.35
RP1L1Q8IWN7 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
RP1L1Q8IWN7 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.35
RP1L1Q8IWN7 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RP1L1Q8IWN7 AL590440.2-201ENST00000641973 1595 ntBASIC12.89□□□□□ -0.35
RP1L1Q8IWN7 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RP1L1Q8IWN7 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
RP1L1Q8IWN7 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
RP1L1Q8IWN7 MIR566-201ENST00000385187 94 ntBASIC12.89□□□□□ -0.35
RP1L1Q8IWN7 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RP1L1Q8IWN7 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
RP1L1Q8IWN7 VENTXP4-201ENST00000449029 958 ntBASIC12.89□□□□□ -0.35
RP1L1Q8IWN7 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC12.89□□□□□ -0.35
RP1L1Q8IWN7 AC122719.1-201ENST00000507989 559 ntTSL 4 BASIC12.89□□□□□ -0.35
RP1L1Q8IWN7 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC12.89□□□□□ -0.35
RP1L1Q8IWN7 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
RP1L1Q8IWN7 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
RP1L1Q8IWN7 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC12.89□□□□□ -0.35
RP1L1Q8IWN7 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
RP1L1Q8IWN7 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RP1L1Q8IWN7 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
RP1L1Q8IWN7 AC138761.6-201ENST00000583997 1423 ntBASIC12.89□□□□□ -0.35
RP1L1Q8IWN7 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RP1L1Q8IWN7 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
RP1L1Q8IWN7 AC068418.2-201ENST00000577309 3703 ntBASIC12.89□□□□□ -0.35
RP1L1Q8IWN7 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RP1L1Q8IWN7 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
RP1L1Q8IWN7 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RP1L1Q8IWN7 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RP1L1Q8IWN7 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC12.89□□□□□ -0.35
RP1L1Q8IWN7 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
RP1L1Q8IWN7 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RP1L1Q8IWN7 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RP1L1Q8IWN7 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
RP1L1Q8IWN7 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
RP1L1Q8IWN7 SUMO4-201ENST00000326669 1066 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
RP1L1Q8IWN7 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
RP1L1Q8IWN7 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
RP1L1Q8IWN7 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC12.89□□□□□ -0.35
RP1L1Q8IWN7 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC12.89□□□□□ -0.35
RP1L1Q8IWN7 ZFP1-207ENST00000567481 493 ntTSL 4 BASIC12.89□□□□□ -0.35
RP1L1Q8IWN7 MBP-238ENST00000580402 915 ntTSL 5 BASIC12.89□□□□□ -0.35
RP1L1Q8IWN7 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC12.89□□□□□ -0.35
RP1L1Q8IWN7 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
RP1L1Q8IWN7 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC12.89□□□□□ -0.35
RP1L1Q8IWN7 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
RP1L1Q8IWN7 AL136172.1-201ENST00000598590 1394 ntBASIC12.89□□□□□ -0.35
RP1L1Q8IWN7 SH3BGRL2-201ENST00000369838 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RP1L1Q8IWN7 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC12.89□□□□□ -0.35
RP1L1Q8IWN7 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
RP1L1Q8IWN7 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RP1L1Q8IWN7 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC12.89□□□□□ -0.35
RP1L1Q8IWN7 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RP1L1Q8IWN7 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RP1L1Q8IWN7 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
RP1L1Q8IWN7 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC12.88□□□□□ -0.35
RP1L1Q8IWN7 NCDN-203ENST00000373253 3677 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
RP1L1Q8IWN7 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms