Protein–RNA interactions for Protein: Q6P3X3

TTC27, Tetratricopeptide repeat protein 27, humanhuman

Predictions only

Length 843 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC27Q6P3X3 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TTC27Q6P3X3 MANEA-AS1-201ENST00000564541 2268 ntBASIC14.63□□□□□ -0.07
TTC27Q6P3X3 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TTC27Q6P3X3 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
TTC27Q6P3X3 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TTC27Q6P3X3 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC14.63□□□□□ -0.07
TTC27Q6P3X3 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC14.63□□□□□ -0.07
TTC27Q6P3X3 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TTC27Q6P3X3 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TTC27Q6P3X3 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
TTC27Q6P3X3 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TTC27Q6P3X3 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TTC27Q6P3X3 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TTC27Q6P3X3 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TTC27Q6P3X3 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC14.63□□□□□ -0.07
TTC27Q6P3X3 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC14.63□□□□□ -0.07
TTC27Q6P3X3 KRT17P7-201ENST00000451704 1104 ntBASIC14.63□□□□□ -0.07
TTC27Q6P3X3 CROCCP4-201ENST00000457096 498 ntBASIC14.63□□□□□ -0.07
TTC27Q6P3X3 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TTC27Q6P3X3 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC14.63□□□□□ -0.07
TTC27Q6P3X3 AP005018.1-201ENST00000525475 301 ntBASIC14.63□□□□□ -0.07
TTC27Q6P3X3 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TTC27Q6P3X3 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TTC27Q6P3X3 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC14.63□□□□□ -0.07
TTC27Q6P3X3 RNF41-210ENST00000552244 716 ntTSL 3 BASIC14.63□□□□□ -0.07
TTC27Q6P3X3 COQ6-210ENST00000554920 649 ntTSL 3 BASIC14.63□□□□□ -0.07
TTC27Q6P3X3 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC14.63□□□□□ -0.07
TTC27Q6P3X3 AC009884.2-201ENST00000603110 324 ntBASIC14.63□□□□□ -0.07
TTC27Q6P3X3 AL355385.1-201ENST00000606123 409 ntBASIC14.63□□□□□ -0.07
TTC27Q6P3X3 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
TTC27Q6P3X3 AC133540.1-201ENST00000620845 1019 ntBASIC14.63□□□□□ -0.07
TTC27Q6P3X3 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC14.63□□□□□ -0.07
TTC27Q6P3X3 AC102953.2-201ENST00000609755 3026 ntBASIC14.63□□□□□ -0.07
TTC27Q6P3X3 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC14.63□□□□□ -0.07
TTC27Q6P3X3 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TTC27Q6P3X3 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC14.63□□□□□ -0.07
TTC27Q6P3X3 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC14.63□□□□□ -0.07
TTC27Q6P3X3 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC14.63□□□□□ -0.07
TTC27Q6P3X3 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
TTC27Q6P3X3 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TTC27Q6P3X3 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
TTC27Q6P3X3 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
TTC27Q6P3X3 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC14.63□□□□□ -0.07
TTC27Q6P3X3 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TTC27Q6P3X3 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
TTC27Q6P3X3 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
TTC27Q6P3X3 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC14.62□□□□□ -0.07
TTC27Q6P3X3 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC14.62□□□□□ -0.07
TTC27Q6P3X3 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TTC27Q6P3X3 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC14.62□□□□□ -0.07
TTC27Q6P3X3 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TTC27Q6P3X3 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TTC27Q6P3X3 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TTC27Q6P3X3 NOBOX-201ENST00000467773 2076 ntTSL 5 BASIC14.62□□□□□ -0.07
TTC27Q6P3X3 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TTC27Q6P3X3 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TTC27Q6P3X3 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
TTC27Q6P3X3 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
TTC27Q6P3X3 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TTC27Q6P3X3 CICP1-201ENST00000416803 2410 ntBASIC14.62□□□□□ -0.07
TTC27Q6P3X3 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC14.62□□□□□ -0.07
TTC27Q6P3X3 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TTC27Q6P3X3 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TTC27Q6P3X3 LBX2-201ENST00000341396 886 ntTSL 3 BASIC14.62□□□□□ -0.07
TTC27Q6P3X3 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TTC27Q6P3X3 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
TTC27Q6P3X3 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TTC27Q6P3X3 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC14.62□□□□□ -0.07
TTC27Q6P3X3 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TTC27Q6P3X3 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
TTC27Q6P3X3 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
TTC27Q6P3X3 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TTC27Q6P3X3 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
TTC27Q6P3X3 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TTC27Q6P3X3 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC14.62□□□□□ -0.07
TTC27Q6P3X3 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC14.62□□□□□ -0.07
TTC27Q6P3X3 GREM1-201ENST00000560677 623 ntTSL 4 BASIC14.62□□□□□ -0.07
TTC27Q6P3X3 AC140658.4-201ENST00000561990 352 ntBASIC14.62□□□□□ -0.07
TTC27Q6P3X3 AC100827.2-201ENST00000563214 1194 ntBASIC14.62□□□□□ -0.07
TTC27Q6P3X3 APRT-204ENST00000563655 709 ntTSL 5 BASIC14.62□□□□□ -0.07
TTC27Q6P3X3 AL596325.1-201ENST00000563991 1082 ntBASIC14.62□□□□□ -0.07
TTC27Q6P3X3 AC073862.5-201ENST00000624129 2027 ntBASIC14.62□□□□□ -0.07
TTC27Q6P3X3 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TTC27Q6P3X3 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TTC27Q6P3X3 GHET1-201ENST00000627071 1906 ntBASIC14.62□□□□□ -0.07
TTC27Q6P3X3 ZNF774-201ENST00000354377 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TTC27Q6P3X3 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
TTC27Q6P3X3 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TTC27Q6P3X3 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC14.62□□□□□ -0.07
TTC27Q6P3X3 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
TTC27Q6P3X3 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TTC27Q6P3X3 HAL-202ENST00000538703 2637 ntTSL 2 BASIC14.62□□□□□ -0.07
TTC27Q6P3X3 AC092171.2-201ENST00000444210 3251 ntTSL 5 BASIC14.61□□□□□ -0.07
TTC27Q6P3X3 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TTC27Q6P3X3 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC14.61□□□□□ -0.07
TTC27Q6P3X3 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TTC27Q6P3X3 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TTC27Q6P3X3 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TTC27Q6P3X3 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
TTC27Q6P3X3 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms