Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LYSMD4Q5XG99 PES1P2-201ENST00000449745 1735 ntBASIC13.73□□□□□ -0.21
LYSMD4Q5XG99 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
LYSMD4Q5XG99 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LYSMD4Q5XG99 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LYSMD4Q5XG99 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC13.73□□□□□ -0.21
LYSMD4Q5XG99 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC13.73□□□□□ -0.21
LYSMD4Q5XG99 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LYSMD4Q5XG99 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LYSMD4Q5XG99 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LYSMD4Q5XG99 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
LYSMD4Q5XG99 KRTAP10-9-201ENST00000397911 1171 ntAPPRIS P2 BASIC13.73□□□□□ -0.21
LYSMD4Q5XG99 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LYSMD4Q5XG99 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
LYSMD4Q5XG99 AC025594.1-201ENST00000469533 543 ntBASIC13.73□□□□□ -0.21
LYSMD4Q5XG99 CD81-209ENST00000492627 886 ntTSL 3 BASIC13.73□□□□□ -0.21
LYSMD4Q5XG99 BCRP4-201ENST00000506079 804 ntBASIC13.73□□□□□ -0.21
LYSMD4Q5XG99 AC145422.1-201ENST00000541574 544 ntTSL 3 BASIC13.73□□□□□ -0.21
LYSMD4Q5XG99 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LYSMD4Q5XG99 AC008735.2-201ENST00000589456 549 ntTSL 5 BASIC13.73□□□□□ -0.21
LYSMD4Q5XG99 SELENOW-202ENST00000593892 550 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
LYSMD4Q5XG99 AC008906.2-201ENST00000606656 474 ntTSL 2 BASIC13.73□□□□□ -0.21
LYSMD4Q5XG99 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC13.73□□□□□ -0.21
LYSMD4Q5XG99 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC13.73□□□□□ -0.21
LYSMD4Q5XG99 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
LYSMD4Q5XG99 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
LYSMD4Q5XG99 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LYSMD4Q5XG99 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
LYSMD4Q5XG99 LTF-203ENST00000426532 2494 ntTSL 2 BASIC13.73□□□□□ -0.21
LYSMD4Q5XG99 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LYSMD4Q5XG99 TBC1D3P2-201ENST00000339120 1513 ntTSL 2 BASIC13.73□□□□□ -0.21
LYSMD4Q5XG99 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LYSMD4Q5XG99 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LYSMD4Q5XG99 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC13.73□□□□□ -0.21
LYSMD4Q5XG99 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
LYSMD4Q5XG99 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.73□□□□□ -0.21
LYSMD4Q5XG99 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC13.73□□□□□ -0.21
LYSMD4Q5XG99 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
LYSMD4Q5XG99 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LYSMD4Q5XG99 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
LYSMD4Q5XG99 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
LYSMD4Q5XG99 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LYSMD4Q5XG99 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LYSMD4Q5XG99 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LYSMD4Q5XG99 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LYSMD4Q5XG99 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC13.72□□□□□ -0.21
LYSMD4Q5XG99 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC13.72□□□□□ -0.21
LYSMD4Q5XG99 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
LYSMD4Q5XG99 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LYSMD4Q5XG99 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
LYSMD4Q5XG99 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LYSMD4Q5XG99 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LYSMD4Q5XG99 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC13.72□□□□□ -0.21
LYSMD4Q5XG99 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
LYSMD4Q5XG99 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
LYSMD4Q5XG99 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LYSMD4Q5XG99 U3.5-201ENST00000363448 216 ntBASIC13.72□□□□□ -0.21
LYSMD4Q5XG99 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LYSMD4Q5XG99 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
LYSMD4Q5XG99 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LYSMD4Q5XG99 AL137244.1-201ENST00000422931 865 ntBASIC13.72□□□□□ -0.21
LYSMD4Q5XG99 AC023141.7-201ENST00000430646 407 ntBASIC13.72□□□□□ -0.21
LYSMD4Q5XG99 KRT8P30-201ENST00000432100 650 ntBASIC13.72□□□□□ -0.21
LYSMD4Q5XG99 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC13.72□□□□□ -0.21
LYSMD4Q5XG99 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC13.72□□□□□ -0.21
LYSMD4Q5XG99 CLDN25-201ENST00000453129 754 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
LYSMD4Q5XG99 AC015795.2-201ENST00000512720 575 ntTSL 3 BASIC13.72□□□□□ -0.21
LYSMD4Q5XG99 MIR2278-201ENST00000516344 96 ntBASIC13.72□□□□□ -0.21
LYSMD4Q5XG99 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC13.72□□□□□ -0.21
LYSMD4Q5XG99 AC091304.3-201ENST00000566500 716 ntBASIC13.72□□□□□ -0.21
LYSMD4Q5XG99 FAM192A-218ENST00000567439 1086 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
LYSMD4Q5XG99 FBXO36P1-201ENST00000579006 471 ntBASIC13.72□□□□□ -0.21
LYSMD4Q5XG99 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
LYSMD4Q5XG99 PTPN20CP-201ENST00000614090 920 ntBASIC13.72□□□□□ -0.21
LYSMD4Q5XG99 AC113385.2-201ENST00000614465 762 ntBASIC13.72□□□□□ -0.21
LYSMD4Q5XG99 AC011462.4-201ENST00000616866 449 ntBASIC13.72□□□□□ -0.21
LYSMD4Q5XG99 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
LYSMD4Q5XG99 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.72□□□□□ -0.21
LYSMD4Q5XG99 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LYSMD4Q5XG99 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LYSMD4Q5XG99 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC13.72□□□□□ -0.21
LYSMD4Q5XG99 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LYSMD4Q5XG99 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LYSMD4Q5XG99 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC13.72□□□□□ -0.21
LYSMD4Q5XG99 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LYSMD4Q5XG99 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LYSMD4Q5XG99 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LYSMD4Q5XG99 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
LYSMD4Q5XG99 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LYSMD4Q5XG99 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LYSMD4Q5XG99 SALL4P6-201ENST00000429385 1691 ntBASIC13.72□□□□□ -0.21
LYSMD4Q5XG99 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LYSMD4Q5XG99 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LYSMD4Q5XG99 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LYSMD4Q5XG99 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
LYSMD4Q5XG99 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LYSMD4Q5XG99 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC13.71□□□□□ -0.21
LYSMD4Q5XG99 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
LYSMD4Q5XG99 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LYSMD4Q5XG99 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms