Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
VPS13DQ5THJ4 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC9.09□□□□□ -0.95
VPS13DQ5THJ4 AC245140.2-201ENST00000624054 1939 ntBASIC9.09□□□□□ -0.95
VPS13DQ5THJ4 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
VPS13DQ5THJ4 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
VPS13DQ5THJ4 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC9.09□□□□□ -0.95
VPS13DQ5THJ4 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
VPS13DQ5THJ4 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
VPS13DQ5THJ4 PHF10-206ENST00000621772 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
VPS13DQ5THJ4 MRPS9-201ENST00000258455 1500 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
VPS13DQ5THJ4 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
VPS13DQ5THJ4 LINC02226-201ENST00000501071 1587 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
VPS13DQ5THJ4 AC025822.1-201ENST00000455525 633 ntTSL 2 BASIC9.09□□□□□ -0.95
VPS13DQ5THJ4 SMCR2-201ENST00000456090 564 ntTSL 2 BASIC9.09□□□□□ -0.95
VPS13DQ5THJ4 AC025259.1-201ENST00000550301 647 ntTSL 3 BASIC9.09□□□□□ -0.95
VPS13DQ5THJ4 AL078624.1-201ENST00000604004 547 ntBASIC9.09□□□□□ -0.95
VPS13DQ5THJ4 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC9.09□□□□□ -0.95
VPS13DQ5THJ4 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
VPS13DQ5THJ4 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
VPS13DQ5THJ4 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
VPS13DQ5THJ4 AC005912.2-201ENST00000619492 2400 ntBASIC9.09□□□□□ -0.95
VPS13DQ5THJ4 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
VPS13DQ5THJ4 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
VPS13DQ5THJ4 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC9.09□□□□□ -0.95
VPS13DQ5THJ4 PDXDC1-218ENST00000627450 2683 ntTSL 2 BASIC9.09□□□□□ -0.95
VPS13DQ5THJ4 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
VPS13DQ5THJ4 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
VPS13DQ5THJ4 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
VPS13DQ5THJ4 AC020763.3-201ENST00000625095 2904 ntBASIC9.09□□□□□ -0.95
VPS13DQ5THJ4 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC9.09□□□□□ -0.95
VPS13DQ5THJ4 AC005014.1-201ENST00000432006 2976 ntBASIC9.09□□□□□ -0.95
VPS13DQ5THJ4 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC9.09□□□□□ -0.95
VPS13DQ5THJ4 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC9.09□□□□□ -0.95
VPS13DQ5THJ4 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
VPS13DQ5THJ4 VPREB3-201ENST00000248948 610 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
VPS13DQ5THJ4 AC131011.1-201ENST00000366134 672 ntTSL 3 BASIC9.09□□□□□ -0.95
VPS13DQ5THJ4 VPREB3-202ENST00000398465 503 ntTSL 3 BASIC9.09□□□□□ -0.95
VPS13DQ5THJ4 PRDM2-213ENST00000503842 705 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
VPS13DQ5THJ4 BCDIN3D-AS1-202ENST00000549124 468 ntTSL 3 BASIC9.09□□□□□ -0.95
VPS13DQ5THJ4 OSGIN1-206ENST00000565123 833 ntTSL 2 BASIC9.09□□□□□ -0.95
VPS13DQ5THJ4 MIR7704-201ENST00000610524 59 ntBASIC9.09□□□□□ -0.95
VPS13DQ5THJ4 MIR6165-201ENST00000614803 84 ntBASIC9.09□□□□□ -0.95
VPS13DQ5THJ4 AL139424.3-202ENST00000641619 917 ntBASIC9.09□□□□□ -0.95
VPS13DQ5THJ4 MRRF-201ENST00000297908 1841 ntTSL 2 BASIC9.09□□□□□ -0.95
VPS13DQ5THJ4 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
VPS13DQ5THJ4 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
VPS13DQ5THJ4 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC9.09□□□□□ -0.95
VPS13DQ5THJ4 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC9.09□□□□□ -0.95
VPS13DQ5THJ4 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.96
VPS13DQ5THJ4 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC9.09□□□□□ -0.96
VPS13DQ5THJ4 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC9.09□□□□□ -0.96
VPS13DQ5THJ4 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC9.09□□□□□ -0.96
VPS13DQ5THJ4 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC9.08□□□□□ -0.96
VPS13DQ5THJ4 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
VPS13DQ5THJ4 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC9.08□□□□□ -0.96
VPS13DQ5THJ4 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
VPS13DQ5THJ4 CTLA4-201ENST00000295854 525 ntTSL 5 BASIC9.08□□□□□ -0.96
VPS13DQ5THJ4 FANK1-203ENST00000368693 1294 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
VPS13DQ5THJ4 AC002066.1-201ENST00000446355 514 ntTSL 5 BASIC9.08□□□□□ -0.96
VPS13DQ5THJ4 AC104212.2-201ENST00000478813 628 ntBASIC9.08□□□□□ -0.96
VPS13DQ5THJ4 PIGCP1-201ENST00000527583 895 ntBASIC9.08□□□□□ -0.96
VPS13DQ5THJ4 AC010547.1-202ENST00000567341 230 ntTSL 2 BASIC9.08□□□□□ -0.96
VPS13DQ5THJ4 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
VPS13DQ5THJ4 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC9.08□□□□□ -0.96
VPS13DQ5THJ4 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC9.08□□□□□ -0.96
VPS13DQ5THJ4 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC9.08□□□□□ -0.96
VPS13DQ5THJ4 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
VPS13DQ5THJ4 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC9.08□□□□□ -0.96
VPS13DQ5THJ4 CCDC175-201ENST00000281581 2487 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
VPS13DQ5THJ4 SNORA50C-201ENST00000408535 133 ntBASIC9.08□□□□□ -0.96
VPS13DQ5THJ4 RPL13AP5-201ENST00000439189 612 ntBASIC9.08□□□□□ -0.96
VPS13DQ5THJ4 AC068858.1-201ENST00000525114 1239 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
VPS13DQ5THJ4 RPL26-209ENST00000584164 873 ntAPPRIS P1 TSL 2 BASIC9.08□□□□□ -0.96
VPS13DQ5THJ4 AC136475.1-203ENST00000602756 1034 ntTSL 3 BASIC9.08□□□□□ -0.96
VPS13DQ5THJ4 SNORA50.1-201ENST00000628590 135 ntBASIC9.08□□□□□ -0.96
VPS13DQ5THJ4 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC9.08□□□□□ -0.96
VPS13DQ5THJ4 TRIML2-207ENST00000512729 1639 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
VPS13DQ5THJ4 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
VPS13DQ5THJ4 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC9.08□□□□□ -0.96
VPS13DQ5THJ4 ELP4-223ENST00000640342 1392 ntTSL 5 BASIC9.08□□□□□ -0.96
VPS13DQ5THJ4 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC9.08□□□□□ -0.96
VPS13DQ5THJ4 SAP18-208ENST00000621421 2300 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
VPS13DQ5THJ4 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
VPS13DQ5THJ4 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC9.08□□□□□ -0.96
VPS13DQ5THJ4 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC9.08□□□□□ -0.96
VPS13DQ5THJ4 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
VPS13DQ5THJ4 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
VPS13DQ5THJ4 CCL24-201ENST00000222902 582 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
VPS13DQ5THJ4 SLC25A5-201ENST00000317881 1274 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
VPS13DQ5THJ4 TUBB2BP1-201ENST00000404155 871 ntBASIC9.08□□□□□ -0.96
VPS13DQ5THJ4 AC004895.1-202ENST00000435547 547 ntTSL 5 BASIC9.08□□□□□ -0.96
VPS13DQ5THJ4 AC006001.2-202ENST00000439360 508 ntTSL 3 BASIC9.08□□□□□ -0.96
VPS13DQ5THJ4 HLA-W-207ENST00000439514 771 ntBASIC9.08□□□□□ -0.96
VPS13DQ5THJ4 AC010136.1-201ENST00000450996 568 ntTSL 4 BASIC9.08□□□□□ -0.96
VPS13DQ5THJ4 NUP210P2-201ENST00000510577 282 ntBASIC9.08□□□□□ -0.96
VPS13DQ5THJ4 AC063977.2-201ENST00000601996 421 ntBASIC9.08□□□□□ -0.96
VPS13DQ5THJ4 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
VPS13DQ5THJ4 AC026271.1-201ENST00000447794 1348 ntBASIC9.08□□□□□ -0.96
VPS13DQ5THJ4 ETNPPL-202ENST00000411864 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC9.08□□□□□ -0.96
VPS13DQ5THJ4 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 141.3 ms