Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 OAZ3-207ENST00000627780 850 ntTSL 5 BASIC17.4■□□□□ 0.38
RC3H1Q5TC82 AC233280.19-201ENST00000633223 136 ntBASIC17.4■□□□□ 0.38
RC3H1Q5TC82 OAZ3-209ENST00000635322 745 ntTSL 5 BASIC17.4■□□□□ 0.38
RC3H1Q5TC82 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
RC3H1Q5TC82 LINC00675-202ENST00000581851 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RC3H1Q5TC82 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RC3H1Q5TC82 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RC3H1Q5TC82 PSMC5-201ENST00000310144 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RC3H1Q5TC82 PROZ-201ENST00000342783 1551 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RC3H1Q5TC82 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RC3H1Q5TC82 HLF-202ENST00000430986 1385 ntTSL 2 BASIC17.4■□□□□ 0.38
RC3H1Q5TC82 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
RC3H1Q5TC82 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RC3H1Q5TC82 CASP8-212ENST00000432109 1629 ntAPPRIS P4 TSL 5 BASIC17.39■□□□□ 0.38
RC3H1Q5TC82 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
RC3H1Q5TC82 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
RC3H1Q5TC82 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
RC3H1Q5TC82 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RC3H1Q5TC82 AC040160.2-201ENST00000623816 1675 ntBASIC17.39■□□□□ 0.37
RC3H1Q5TC82 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RC3H1Q5TC82 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RC3H1Q5TC82 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RC3H1Q5TC82 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC17.39■□□□□ 0.37
RC3H1Q5TC82 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
RC3H1Q5TC82 PDCD6-201ENST00000264933 1135 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
RC3H1Q5TC82 RNF181-201ENST00000306368 569 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RC3H1Q5TC82 ARR3-201ENST00000307959 1292 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RC3H1Q5TC82 MYL4-202ENST00000393450 855 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RC3H1Q5TC82 ASS1P1-201ENST00000402854 1237 ntBASIC17.39■□□□□ 0.37
RC3H1Q5TC82 AL359182.1-201ENST00000435915 469 ntTSL 3 BASIC17.39■□□□□ 0.37
RC3H1Q5TC82 RNF181-203ENST00000441634 844 ntAPPRIS ALT1 TSL 2 BASIC17.39■□□□□ 0.37
RC3H1Q5TC82 AC010900.1-201ENST00000449849 1296 ntBASIC17.39■□□□□ 0.37
RC3H1Q5TC82 RPL29P2-202ENST00000498671 657 ntBASIC17.39■□□□□ 0.37
RC3H1Q5TC82 AC087442.1-201ENST00000525563 249 ntTSL 2 BASIC17.39■□□□□ 0.37
RC3H1Q5TC82 AC073896.3-201ENST00000546789 437 ntTSL 5 BASIC17.39■□□□□ 0.37
RC3H1Q5TC82 AC090282.1-201ENST00000572821 534 ntTSL 3 BASIC17.39■□□□□ 0.37
RC3H1Q5TC82 SRRM2-AS1-204ENST00000573802 818 ntTSL 2 BASIC17.39■□□□□ 0.37
RC3H1Q5TC82 IRF3-213ENST00000596765 710 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RC3H1Q5TC82 IFITM2-205ENST00000602569 605 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RC3H1Q5TC82 ITGB2-AS1-204ENST00000609592 482 ntTSL 5 BASIC17.39■□□□□ 0.37
RC3H1Q5TC82 AL353658.2-201ENST00000629794 519 ntTSL 5 BASIC17.39■□□□□ 0.37
RC3H1Q5TC82 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
RC3H1Q5TC82 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RC3H1Q5TC82 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RC3H1Q5TC82 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC17.39■□□□□ 0.37
RC3H1Q5TC82 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC17.39■□□□□ 0.37
RC3H1Q5TC82 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RC3H1Q5TC82 DMC1-207ENST00000616615 1595 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RC3H1Q5TC82 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
RC3H1Q5TC82 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
RC3H1Q5TC82 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RC3H1Q5TC82 SEC13-209ENST00000397117 1603 ntTSL 5 BASIC17.39■□□□□ 0.37
RC3H1Q5TC82 OS9-207ENST00000439210 1946 ntTSL 2 BASIC17.39■□□□□ 0.37
RC3H1Q5TC82 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RC3H1Q5TC82 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC17.39■□□□□ 0.37
RC3H1Q5TC82 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC17.38■□□□□ 0.37
RC3H1Q5TC82 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
RC3H1Q5TC82 AC012617.1-204ENST00000586340 2305 ntBASIC17.38■□□□□ 0.37
RC3H1Q5TC82 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RC3H1Q5TC82 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RC3H1Q5TC82 NR1H4-203ENST00000392986 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RC3H1Q5TC82 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC17.38■□□□□ 0.37
RC3H1Q5TC82 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.38■□□□□ 0.37
RC3H1Q5TC82 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
RC3H1Q5TC82 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.38■□□□□ 0.37
RC3H1Q5TC82 GRIA3-208ENST00000620581 2991 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RC3H1Q5TC82 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
RC3H1Q5TC82 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC17.38■□□□□ 0.37
RC3H1Q5TC82 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RC3H1Q5TC82 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RC3H1Q5TC82 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RC3H1Q5TC82 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
RC3H1Q5TC82 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RC3H1Q5TC82 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RC3H1Q5TC82 IL1F10-201ENST00000341010 1013 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RC3H1Q5TC82 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
RC3H1Q5TC82 PPP1R7-205ENST00000404405 1009 ntTSL 3 BASIC17.38■□□□□ 0.37
RC3H1Q5TC82 SLC12A9-AS1-201ENST00000412754 369 ntTSL 3 BASIC17.38■□□□□ 0.37
RC3H1Q5TC82 AC231533.1-201ENST00000416061 925 ntTSL 3 BASIC17.38■□□□□ 0.37
RC3H1Q5TC82 PLA2G1B-202ENST00000423423 423 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RC3H1Q5TC82 YY1P2-201ENST00000438766 948 ntBASIC17.38■□□□□ 0.37
RC3H1Q5TC82 DLGAP4-AS1-203ENST00000439595 1207 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RC3H1Q5TC82 PRR34-AS1-203ENST00000451166 877 ntTSL 3 BASIC17.38■□□□□ 0.37
RC3H1Q5TC82 AC019118.1-201ENST00000454530 435 ntTSL 3 BASIC17.38■□□□□ 0.37
RC3H1Q5TC82 AC233724.9-201ENST00000511694 407 ntBASIC17.38■□□□□ 0.37
RC3H1Q5TC82 RORA-AS1-202ENST00000558140 869 ntTSL 2 BASIC17.38■□□□□ 0.37
RC3H1Q5TC82 AC090907.2-201ENST00000559857 720 ntTSL 3 BASIC17.38■□□□□ 0.37
RC3H1Q5TC82 NIFKP4-201ENST00000567275 1192 ntBASIC17.38■□□□□ 0.37
RC3H1Q5TC82 AL353997.6-201ENST00000583394 621 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RC3H1Q5TC82 USP32P3-202ENST00000583574 611 ntTSL 3 BASIC17.38■□□□□ 0.37
RC3H1Q5TC82 LINC02081-201ENST00000586185 877 ntTSL 3 BASIC17.38■□□□□ 0.37
RC3H1Q5TC82 FAM32A-204ENST00000588367 798 ntTSL 2 BASIC17.38■□□□□ 0.37
RC3H1Q5TC82 AL162731.1-201ENST00000613248 876 ntTSL 3 BASIC17.38■□□□□ 0.37
RC3H1Q5TC82 HIST1H3E-201ENST00000614911 462 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
RC3H1Q5TC82 AC106782.5-201ENST00000616011 337 ntBASIC17.38■□□□□ 0.37
RC3H1Q5TC82 AC079779.4-201ENST00000619113 548 ntTSL 5 BASIC17.38■□□□□ 0.37
RC3H1Q5TC82 Metazoa_SRP.156-201ENST00000622344 262 ntBASIC17.38■□□□□ 0.37
RC3H1Q5TC82 HRH2-202ENST00000377291 2561 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RC3H1Q5TC82 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RC3H1Q5TC82 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms