Protein–RNA interactions for Protein: Q03591

CFHR1, Complement factor H-related protein 1, humanhuman

Predictions only

Length 330 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR1Q03591 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CFHR1Q03591 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CFHR1Q03591 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC13.36□□□□□ -0.27
CFHR1Q03591 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
CFHR1Q03591 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
CFHR1Q03591 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC13.36□□□□□ -0.27
CFHR1Q03591 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC13.35□□□□□ -0.27
CFHR1Q03591 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CFHR1Q03591 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
CFHR1Q03591 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
CFHR1Q03591 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CFHR1Q03591 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
CFHR1Q03591 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CFHR1Q03591 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC13.35□□□□□ -0.27
CFHR1Q03591 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CFHR1Q03591 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CFHR1Q03591 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CFHR1Q03591 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CFHR1Q03591 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CFHR1Q03591 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC13.35□□□□□ -0.27
CFHR1Q03591 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CFHR1Q03591 KRT18P46-201ENST00000435568 1279 ntBASIC13.35□□□□□ -0.27
CFHR1Q03591 AC008026.2-201ENST00000495438 348 ntBASIC13.35□□□□□ -0.27
CFHR1Q03591 AC090136.2-201ENST00000517809 420 ntBASIC13.35□□□□□ -0.27
CFHR1Q03591 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC13.35□□□□□ -0.27
CFHR1Q03591 FXYD6-208ENST00000529335 708 ntTSL 3 BASIC13.35□□□□□ -0.27
CFHR1Q03591 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC13.35□□□□□ -0.27
CFHR1Q03591 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC13.35□□□□□ -0.27
CFHR1Q03591 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC13.35□□□□□ -0.27
CFHR1Q03591 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC13.35□□□□□ -0.27
CFHR1Q03591 AL136982.5-201ENST00000605222 294 ntBASIC13.35□□□□□ -0.27
CFHR1Q03591 AC008972.2-201ENST00000606587 494 ntBASIC13.35□□□□□ -0.27
CFHR1Q03591 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC13.35□□□□□ -0.27
CFHR1Q03591 GARS-210ENST00000627489 324 ntTSL 4 BASIC13.35□□□□□ -0.27
CFHR1Q03591 MST1P2-201ENST00000457982 2291 ntBASIC13.35□□□□□ -0.27
CFHR1Q03591 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC13.35□□□□□ -0.27
CFHR1Q03591 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CFHR1Q03591 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CFHR1Q03591 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CFHR1Q03591 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CFHR1Q03591 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
CFHR1Q03591 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CFHR1Q03591 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC13.35□□□□□ -0.27
CFHR1Q03591 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CFHR1Q03591 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CFHR1Q03591 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CFHR1Q03591 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
CFHR1Q03591 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CFHR1Q03591 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CFHR1Q03591 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CFHR1Q03591 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CFHR1Q03591 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
CFHR1Q03591 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
CFHR1Q03591 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
CFHR1Q03591 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CFHR1Q03591 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
CFHR1Q03591 AL157996.1-201ENST00000624684 2299 ntBASIC13.34□□□□□ -0.27
CFHR1Q03591 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CFHR1Q03591 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CFHR1Q03591 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CFHR1Q03591 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC13.34□□□□□ -0.27
CFHR1Q03591 WASH7P-201ENST00000488147 1351 ntBASIC13.34□□□□□ -0.27
CFHR1Q03591 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CFHR1Q03591 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC13.34□□□□□ -0.27
CFHR1Q03591 AC090643.2-201ENST00000623442 2029 ntBASIC13.34□□□□□ -0.27
CFHR1Q03591 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
CFHR1Q03591 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CFHR1Q03591 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CFHR1Q03591 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC13.34□□□□□ -0.27
CFHR1Q03591 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC13.34□□□□□ -0.27
CFHR1Q03591 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
CFHR1Q03591 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CFHR1Q03591 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC13.34□□□□□ -0.27
CFHR1Q03591 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
CFHR1Q03591 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CFHR1Q03591 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CFHR1Q03591 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CFHR1Q03591 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
CFHR1Q03591 MIR1307-201ENST00000408840 149 ntBASIC13.34□□□□□ -0.27
CFHR1Q03591 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC13.34□□□□□ -0.27
CFHR1Q03591 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CFHR1Q03591 LINP1-201ENST00000417112 917 ntTSL 2 BASIC13.34□□□□□ -0.27
CFHR1Q03591 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
CFHR1Q03591 AC005722.1-201ENST00000431878 964 ntBASIC13.34□□□□□ -0.27
CFHR1Q03591 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC13.34□□□□□ -0.27
CFHR1Q03591 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC13.34□□□□□ -0.27
CFHR1Q03591 RPL3P5-201ENST00000441645 1232 ntBASIC13.34□□□□□ -0.27
CFHR1Q03591 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC13.34□□□□□ -0.27
CFHR1Q03591 AC106047.2-201ENST00000511723 743 ntBASIC13.34□□□□□ -0.27
CFHR1Q03591 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC13.34□□□□□ -0.27
CFHR1Q03591 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC13.34□□□□□ -0.27
CFHR1Q03591 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC13.34□□□□□ -0.27
CFHR1Q03591 AC068831.5-201ENST00000557387 328 ntBASIC13.34□□□□□ -0.27
CFHR1Q03591 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC13.34□□□□□ -0.27
CFHR1Q03591 CES1P2-201ENST00000566467 1242 ntBASIC13.34□□□□□ -0.27
CFHR1Q03591 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC13.34□□□□□ -0.27
CFHR1Q03591 CYP4F36P-201ENST00000589193 186 ntBASIC13.34□□□□□ -0.27
CFHR1Q03591 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CFHR1Q03591 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CFHR1Q03591 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms