Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CDKL1Q00532 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDKL1Q00532 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDKL1Q00532 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
CDKL1Q00532 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDKL1Q00532 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDKL1Q00532 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDKL1Q00532 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
CDKL1Q00532 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
CDKL1Q00532 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC13.99□□□□□ -0.17
CDKL1Q00532 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CDKL1Q00532 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDKL1Q00532 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDKL1Q00532 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CDKL1Q00532 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDKL1Q00532 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC13.99□□□□□ -0.17
CDKL1Q00532 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CDKL1Q00532 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
CDKL1Q00532 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC13.99□□□□□ -0.17
CDKL1Q00532 HNRNPA1P63-201ENST00000427917 963 ntBASIC13.99□□□□□ -0.17
CDKL1Q00532 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC13.99□□□□□ -0.17
CDKL1Q00532 BNIP3P42-201ENST00000454982 569 ntBASIC13.99□□□□□ -0.17
CDKL1Q00532 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC13.99□□□□□ -0.17
CDKL1Q00532 RPL18P13-201ENST00000478088 569 ntBASIC13.99□□□□□ -0.17
CDKL1Q00532 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC13.99□□□□□ -0.17
CDKL1Q00532 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC13.99□□□□□ -0.17
CDKL1Q00532 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC13.99□□□□□ -0.17
CDKL1Q00532 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC13.99□□□□□ -0.17
CDKL1Q00532 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC13.99□□□□□ -0.17
CDKL1Q00532 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC13.99□□□□□ -0.17
CDKL1Q00532 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC13.99□□□□□ -0.17
CDKL1Q00532 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC13.99□□□□□ -0.17
CDKL1Q00532 BNIP3P29-201ENST00000598302 571 ntBASIC13.99□□□□□ -0.17
CDKL1Q00532 TECR-220ENST00000600083 1204 ntTSL 2 BASIC13.99□□□□□ -0.17
CDKL1Q00532 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC13.99□□□□□ -0.17
CDKL1Q00532 AC011447.5-201ENST00000616168 564 ntBASIC13.99□□□□□ -0.17
CDKL1Q00532 AC022748.3-201ENST00000621828 275 ntBASIC13.99□□□□□ -0.17
CDKL1Q00532 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDKL1Q00532 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDKL1Q00532 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDKL1Q00532 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDKL1Q00532 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDKL1Q00532 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDKL1Q00532 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDKL1Q00532 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDKL1Q00532 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
CDKL1Q00532 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CDKL1Q00532 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDKL1Q00532 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC13.98□□□□□ -0.17
CDKL1Q00532 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CDKL1Q00532 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CDKL1Q00532 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDKL1Q00532 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC13.98□□□□□ -0.17
CDKL1Q00532 AC018629.1-201ENST00000623381 1736 ntBASIC13.98□□□□□ -0.17
CDKL1Q00532 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC13.98□□□□□ -0.17
CDKL1Q00532 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CDKL1Q00532 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDKL1Q00532 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
CDKL1Q00532 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC13.98□□□□□ -0.17
CDKL1Q00532 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
CDKL1Q00532 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CDKL1Q00532 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDKL1Q00532 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDKL1Q00532 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC13.98□□□□□ -0.17
CDKL1Q00532 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.98□□□□□ -0.17
CDKL1Q00532 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDKL1Q00532 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDKL1Q00532 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDKL1Q00532 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDKL1Q00532 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDKL1Q00532 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDKL1Q00532 JTB-202ENST00000356648 1040 ntTSL 2 BASIC13.98□□□□□ -0.17
CDKL1Q00532 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDKL1Q00532 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
CDKL1Q00532 HMGA1P1-201ENST00000415560 1062 ntBASIC13.98□□□□□ -0.17
CDKL1Q00532 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CDKL1Q00532 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CDKL1Q00532 ATP5G2P4-201ENST00000442175 420 ntBASIC13.98□□□□□ -0.17
CDKL1Q00532 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC13.98□□□□□ -0.17
CDKL1Q00532 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC13.98□□□□□ -0.17
CDKL1Q00532 RPL13AP20-201ENST00000459725 609 ntBASIC13.98□□□□□ -0.17
CDKL1Q00532 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC13.98□□□□□ -0.17
CDKL1Q00532 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
CDKL1Q00532 AC008805.1-201ENST00000590892 364 ntBASIC13.98□□□□□ -0.17
CDKL1Q00532 DDX5-235ENST00000630471 473 ntTSL 4 BASIC13.98□□□□□ -0.17
CDKL1Q00532 PCBP2-OT1-201ENST00000634357 590 ntBASIC13.98□□□□□ -0.17
CDKL1Q00532 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CDKL1Q00532 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CDKL1Q00532 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC13.98□□□□□ -0.17
CDKL1Q00532 USP39-207ENST00000450066 2086 ntTSL 2 BASIC13.98□□□□□ -0.17
CDKL1Q00532 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDKL1Q00532 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CDKL1Q00532 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CDKL1Q00532 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC13.98□□□□□ -0.17
CDKL1Q00532 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDKL1Q00532 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC13.98□□□□□ -0.17
CDKL1Q00532 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC13.98□□□□□ -0.17
CDKL1Q00532 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC13.98□□□□□ -0.17
CDKL1Q00532 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDKL1Q00532 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms