Protein–RNA interactions for Protein: P98172

EFNB1, Ephrin-B1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1P98172 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC12.63□□□□□ -0.39
EFNB1P98172 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
EFNB1P98172 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
EFNB1P98172 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
EFNB1P98172 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
EFNB1P98172 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC12.63□□□□□ -0.39
EFNB1P98172 RPS15A-213ENST00000576436 2190 ntTSL 4 BASIC12.63□□□□□ -0.39
EFNB1P98172 POLL-202ENST00000339310 2289 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
EFNB1P98172 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
EFNB1P98172 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
EFNB1P98172 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
EFNB1P98172 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
EFNB1P98172 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
EFNB1P98172 ZWILCH-203ENST00000535141 2206 ntTSL 2 BASIC12.62□□□□□ -0.39
EFNB1P98172 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC12.62□□□□□ -0.39
EFNB1P98172 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
EFNB1P98172 C9orf170-201ENST00000623052 3239 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
EFNB1P98172 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
EFNB1P98172 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
EFNB1P98172 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC12.62□□□□□ -0.39
EFNB1P98172 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
EFNB1P98172 NUDT9-203ENST00000473942 2458 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
EFNB1P98172 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
EFNB1P98172 KIR2DL3-201ENST00000342376 1590 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
EFNB1P98172 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
EFNB1P98172 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
EFNB1P98172 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
EFNB1P98172 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
EFNB1P98172 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
EFNB1P98172 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
EFNB1P98172 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC12.62□□□□□ -0.39
EFNB1P98172 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
EFNB1P98172 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
EFNB1P98172 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC12.62□□□□□ -0.39
EFNB1P98172 HOMER2P2-201ENST00000451621 847 ntBASIC12.62□□□□□ -0.39
EFNB1P98172 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
EFNB1P98172 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC12.62□□□□□ -0.39
EFNB1P98172 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
EFNB1P98172 CR383656.12-201ENST00000549567 513 ntBASIC12.62□□□□□ -0.39
EFNB1P98172 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
EFNB1P98172 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC12.62□□□□□ -0.39
EFNB1P98172 NFATC2IP-206ENST00000568148 1157 ntTSL 2 BASIC12.62□□□□□ -0.39
EFNB1P98172 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
EFNB1P98172 PIGL-212ENST00000581006 554 ntTSL 4 BASIC12.62□□□□□ -0.39
EFNB1P98172 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
EFNB1P98172 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC12.62□□□□□ -0.39
EFNB1P98172 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
EFNB1P98172 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC12.62□□□□□ -0.39
EFNB1P98172 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
EFNB1P98172 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
EFNB1P98172 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC12.62□□□□□ -0.39
EFNB1P98172 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
EFNB1P98172 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
EFNB1P98172 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
EFNB1P98172 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC12.62□□□□□ -0.39
EFNB1P98172 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
EFNB1P98172 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
EFNB1P98172 CICP9-201ENST00000444451 1913 ntBASIC12.62□□□□□ -0.39
EFNB1P98172 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
EFNB1P98172 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
EFNB1P98172 CEP112-202ENST00000392769 3517 ntAPPRIS P4 TSL 5 BASIC12.62□□□□□ -0.39
EFNB1P98172 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
EFNB1P98172 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
EFNB1P98172 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
EFNB1P98172 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
EFNB1P98172 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC12.62□□□□□ -0.39
EFNB1P98172 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
EFNB1P98172 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
EFNB1P98172 CHMP4C-201ENST00000297265 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
EFNB1P98172 SARS-202ENST00000369923 1882 ntTSL 5 BASIC12.61□□□□□ -0.39
EFNB1P98172 AL139385.1-201ENST00000611744 3272 ntBASIC12.61□□□□□ -0.39
EFNB1P98172 AC008040.5-201ENST00000599781 1781 ntBASIC12.61□□□□□ -0.39
EFNB1P98172 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
EFNB1P98172 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
EFNB1P98172 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC12.61□□□□□ -0.39
EFNB1P98172 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC12.61□□□□□ -0.39
EFNB1P98172 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
EFNB1P98172 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
EFNB1P98172 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
EFNB1P98172 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
EFNB1P98172 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC12.61□□□□□ -0.39
EFNB1P98172 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
EFNB1P98172 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC12.61□□□□□ -0.39
EFNB1P98172 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
EFNB1P98172 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
EFNB1P98172 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
EFNB1P98172 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
EFNB1P98172 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
EFNB1P98172 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
EFNB1P98172 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
EFNB1P98172 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC12.61□□□□□ -0.39
EFNB1P98172 CRB3P1-201ENST00000449338 276 ntBASIC12.61□□□□□ -0.39
EFNB1P98172 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC12.61□□□□□ -0.39
EFNB1P98172 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC12.61□□□□□ -0.39
EFNB1P98172 AP000812.2-201ENST00000538934 718 ntBASIC12.61□□□□□ -0.39
EFNB1P98172 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
EFNB1P98172 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
EFNB1P98172 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC12.61□□□□□ -0.39
EFNB1P98172 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC12.61□□□□□ -0.39
EFNB1P98172 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms