Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
H3F3AP84243 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
H3F3AP84243 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
H3F3AP84243 KRT17P5-201ENST00000332088 839 ntBASIC12.67□□□□□ -0.38
H3F3AP84243 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC12.67□□□□□ -0.38
H3F3AP84243 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
H3F3AP84243 BX679664.3-201ENST00000414070 555 ntBASIC12.67□□□□□ -0.38
H3F3AP84243 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC12.67□□□□□ -0.38
H3F3AP84243 MSRA-203ENST00000441698 788 ntTSL 2 BASIC12.67□□□□□ -0.38
H3F3AP84243 Z97180.1-201ENST00000445173 988 ntBASIC12.67□□□□□ -0.38
H3F3AP84243 RPSAP15-201ENST00000448168 861 ntBASIC12.67□□□□□ -0.38
H3F3AP84243 AL353637.1-201ENST00000451571 732 ntBASIC12.67□□□□□ -0.38
H3F3AP84243 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC12.67□□□□□ -0.38
H3F3AP84243 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC12.67□□□□□ -0.38
H3F3AP84243 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
H3F3AP84243 AC113935.1-201ENST00000471722 555 ntBASIC12.67□□□□□ -0.38
H3F3AP84243 TSACC-208ENST00000481479 741 ntTSL 2 BASIC12.67□□□□□ -0.38
H3F3AP84243 NAT9-211ENST00000580632 799 ntTSL 3 BASIC12.67□□□□□ -0.38
H3F3AP84243 KRT18P8-201ENST00000581937 1246 ntBASIC12.67□□□□□ -0.38
H3F3AP84243 MIR4754-201ENST00000582477 89 ntBASIC12.67□□□□□ -0.38
H3F3AP84243 LINC01783-202ENST00000614408 828 ntBASIC12.67□□□□□ -0.38
H3F3AP84243 BX284668.2-205ENST00000619677 828 ntBASIC12.67□□□□□ -0.38
H3F3AP84243 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC12.67□□□□□ -0.38
H3F3AP84243 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
H3F3AP84243 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
H3F3AP84243 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
H3F3AP84243 KRT8P31-201ENST00000504812 1408 ntBASIC12.67□□□□□ -0.38
H3F3AP84243 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
H3F3AP84243 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC12.67□□□□□ -0.38
H3F3AP84243 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
H3F3AP84243 AC067931.2-201ENST00000623655 2003 ntBASIC12.67□□□□□ -0.38
H3F3AP84243 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
H3F3AP84243 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
H3F3AP84243 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
H3F3AP84243 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
H3F3AP84243 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
H3F3AP84243 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
H3F3AP84243 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
H3F3AP84243 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
H3F3AP84243 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
H3F3AP84243 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
H3F3AP84243 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
H3F3AP84243 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
H3F3AP84243 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC12.66□□□□□ -0.38
H3F3AP84243 AC061965.1-201ENST00000560524 1465 ntBASIC12.66□□□□□ -0.38
H3F3AP84243 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC12.66□□□□□ -0.38
H3F3AP84243 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC12.66□□□□□ -0.38
H3F3AP84243 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
H3F3AP84243 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
H3F3AP84243 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
H3F3AP84243 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC12.66□□□□□ -0.38
H3F3AP84243 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
H3F3AP84243 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
H3F3AP84243 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC12.66□□□□□ -0.38
H3F3AP84243 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
H3F3AP84243 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
H3F3AP84243 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
H3F3AP84243 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
H3F3AP84243 AC006987.1-201ENST00000413610 527 ntBASIC12.66□□□□□ -0.38
H3F3AP84243 PARVG-202ENST00000415224 999 ntTSL 2 BASIC12.66□□□□□ -0.38
H3F3AP84243 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC12.66□□□□□ -0.38
H3F3AP84243 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC12.66□□□□□ -0.38
H3F3AP84243 AC005740.1-201ENST00000515639 522 ntBASIC12.66□□□□□ -0.38
H3F3AP84243 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
H3F3AP84243 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
H3F3AP84243 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
H3F3AP84243 AC242376.1-201ENST00000559033 726 ntBASIC12.66□□□□□ -0.38
H3F3AP84243 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC12.66□□□□□ -0.38
H3F3AP84243 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC12.66□□□□□ -0.38
H3F3AP84243 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
H3F3AP84243 STUB1-204ENST00000564370 875 ntTSL 2 BASIC12.66□□□□□ -0.38
H3F3AP84243 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC12.66□□□□□ -0.38
H3F3AP84243 AC026803.1-201ENST00000569130 274 ntBASIC12.66□□□□□ -0.38
H3F3AP84243 RN7SL455P-201ENST00000580629 282 ntBASIC12.66□□□□□ -0.38
H3F3AP84243 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC12.66□□□□□ -0.38
H3F3AP84243 IRF3-215ENST00000596822 823 ntTSL 3 BASIC12.66□□□□□ -0.38
H3F3AP84243 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC12.66□□□□□ -0.38
H3F3AP84243 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
H3F3AP84243 AC138627.1-207ENST00000641560 1006 ntBASIC12.66□□□□□ -0.38
H3F3AP84243 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
H3F3AP84243 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC12.66□□□□□ -0.38
H3F3AP84243 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
H3F3AP84243 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
H3F3AP84243 C1R-201ENST00000535233 2211 ntTSL 2 BASIC12.66□□□□□ -0.38
H3F3AP84243 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
H3F3AP84243 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
H3F3AP84243 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
H3F3AP84243 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
H3F3AP84243 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
H3F3AP84243 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
H3F3AP84243 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
H3F3AP84243 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC12.66□□□□□ -0.38
H3F3AP84243 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC12.66□□□□□ -0.38
H3F3AP84243 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
H3F3AP84243 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
H3F3AP84243 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC12.65□□□□□ -0.38
H3F3AP84243 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
H3F3AP84243 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
H3F3AP84243 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
H3F3AP84243 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms