Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
HIST1H3AP68431 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC12.39□□□□□ -0.43
HIST1H3AP68431 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC12.39□□□□□ -0.43
HIST1H3AP68431 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HIST1H3AP68431 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC12.38□□□□□ -0.43
HIST1H3AP68431 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H3AP68431 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H3AP68431 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H3AP68431 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
HIST1H3AP68431 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC12.38□□□□□ -0.43
HIST1H3AP68431 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H3AP68431 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC12.38□□□□□ -0.43
HIST1H3AP68431 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H3AP68431 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC12.38□□□□□ -0.43
HIST1H3AP68431 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
HIST1H3AP68431 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
HIST1H3AP68431 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H3AP68431 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H3AP68431 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
HIST1H3AP68431 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC12.38□□□□□ -0.43
HIST1H3AP68431 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
HIST1H3AP68431 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H3AP68431 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H3AP68431 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H3AP68431 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC12.38□□□□□ -0.43
HIST1H3AP68431 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H3AP68431 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H3AP68431 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H3AP68431 RN7SKP214-201ENST00000364208 315 ntBASIC12.38□□□□□ -0.43
HIST1H3AP68431 LBH-202ENST00000401506 485 ntTSL 3 BASIC12.38□□□□□ -0.43
HIST1H3AP68431 RPS9P1-201ENST00000419943 583 ntBASIC12.38□□□□□ -0.43
HIST1H3AP68431 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC12.38□□□□□ -0.43
HIST1H3AP68431 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC12.38□□□□□ -0.43
HIST1H3AP68431 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H3AP68431 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC12.38□□□□□ -0.43
HIST1H3AP68431 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC12.38□□□□□ -0.43
HIST1H3AP68431 RN7SL530P-201ENST00000485097 298 ntBASIC12.38□□□□□ -0.43
HIST1H3AP68431 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC12.38□□□□□ -0.43
HIST1H3AP68431 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC12.38□□□□□ -0.43
HIST1H3AP68431 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC12.38□□□□□ -0.43
HIST1H3AP68431 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC12.38□□□□□ -0.43
HIST1H3AP68431 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H3AP68431 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC12.38□□□□□ -0.43
HIST1H3AP68431 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
HIST1H3AP68431 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC12.38□□□□□ -0.43
HIST1H3AP68431 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
HIST1H3AP68431 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H3AP68431 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H3AP68431 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H3AP68431 STK3-218ENST00000617590 2485 ntTSL 5 BASIC12.38□□□□□ -0.43
HIST1H3AP68431 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H3AP68431 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC12.38□□□□□ -0.43
HIST1H3AP68431 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H3AP68431 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
HIST1H3AP68431 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H3AP68431 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
HIST1H3AP68431 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H3AP68431 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC12.38□□□□□ -0.43
HIST1H3AP68431 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC12.38□□□□□ -0.43
HIST1H3AP68431 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H3AP68431 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H3AP68431 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H3AP68431 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H3AP68431 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H3AP68431 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H3AP68431 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC12.38□□□□□ -0.43
HIST1H3AP68431 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H3AP68431 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H3AP68431 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H3AP68431 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
HIST1H3AP68431 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HIST1H3AP68431 GRN-222ENST00000639447 1314 ntTSL 2 BASIC12.37□□□□□ -0.43
HIST1H3AP68431 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
HIST1H3AP68431 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
HIST1H3AP68431 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC12.37□□□□□ -0.43
HIST1H3AP68431 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HIST1H3AP68431 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC12.37□□□□□ -0.43
HIST1H3AP68431 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC12.37□□□□□ -0.43
HIST1H3AP68431 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
HIST1H3AP68431 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
HIST1H3AP68431 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HIST1H3AP68431 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC12.37□□□□□ -0.43
HIST1H3AP68431 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC12.37□□□□□ -0.43
HIST1H3AP68431 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
HIST1H3AP68431 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
HIST1H3AP68431 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC12.37□□□□□ -0.43
HIST1H3AP68431 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
HIST1H3AP68431 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
HIST1H3AP68431 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HIST1H3AP68431 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC12.37□□□□□ -0.43
HIST1H3AP68431 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC12.37□□□□□ -0.43
HIST1H3AP68431 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
HIST1H3AP68431 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HIST1H3AP68431 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
HIST1H3AP68431 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
HIST1H3AP68431 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HIST1H3AP68431 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HIST1H3AP68431 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
HIST1H3AP68431 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HIST1H3AP68431 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms