Protein–RNA interactions for Protein: P58876

HIST1H2BD, Histone H2B type 1-D, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BDP58876 PTPN1-201ENST00000371621 4008 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
HIST1H2BDP58876 RAB43-203ENST00000393305 4215 ntAPPRIS P1 TSL 4 BASIC10.58□□□□□ -0.72
HIST1H2BDP58876 CAMK2A-201ENST00000348628 5322 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
HIST1H2BDP58876 NBPF12-208ENST00000617931 7061 ntAPPRIS P2 TSL 5 BASIC10.58□□□□□ -0.72
HIST1H2BDP58876 WASF3-201ENST00000335327 4790 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
HIST1H2BDP58876 NPHS1-202ENST00000378910 4276 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
HIST1H2BDP58876 AMACR-201ENST00000335606 4153 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
HIST1H2BDP58876 BANK1-201ENST00000322953 3372 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
HIST1H2BDP58876 ZNF23-201ENST00000357254 3186 ntAPPRIS P3 TSL 2 BASIC10.58□□□□□ -0.72
HIST1H2BDP58876 PLK4-210ENST00000514379 3060 ntTSL 2 BASIC10.58□□□□□ -0.72
HIST1H2BDP58876 CHTF8-201ENST00000306585 2561 ntBASIC10.58□□□□□ -0.72
HIST1H2BDP58876 HHIPL2-201ENST00000343410 2575 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
HIST1H2BDP58876 INHBC-201ENST00000309668 1992 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
HIST1H2BDP58876 SYNM-203ENST00000560674 5908 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
HIST1H2BDP58876 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
HIST1H2BDP58876 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
HIST1H2BDP58876 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
HIST1H2BDP58876 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC10.58□□□□□ -0.72
HIST1H2BDP58876 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
HIST1H2BDP58876 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
HIST1H2BDP58876 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
HIST1H2BDP58876 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
HIST1H2BDP58876 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
HIST1H2BDP58876 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
HIST1H2BDP58876 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
HIST1H2BDP58876 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
HIST1H2BDP58876 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC10.58□□□□□ -0.72
HIST1H2BDP58876 INE1-201ENST00000456273 945 ntBASIC10.58□□□□□ -0.72
HIST1H2BDP58876 AC108073.2-201ENST00000464002 357 ntBASIC10.58□□□□□ -0.72
HIST1H2BDP58876 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC10.58□□□□□ -0.72
HIST1H2BDP58876 AC104819.1-201ENST00000504587 486 ntBASIC10.58□□□□□ -0.72
HIST1H2BDP58876 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
HIST1H2BDP58876 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
HIST1H2BDP58876 AC034105.1-201ENST00000563488 319 ntBASIC10.58□□□□□ -0.72
HIST1H2BDP58876 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
HIST1H2BDP58876 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC10.58□□□□□ -0.72
HIST1H2BDP58876 AC099336.1-202ENST00000602961 463 ntBASIC10.58□□□□□ -0.72
HIST1H2BDP58876 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC10.58□□□□□ -0.72
HIST1H2BDP58876 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
HIST1H2BDP58876 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC10.58□□□□□ -0.72
HIST1H2BDP58876 AL161645.1-201ENST00000622716 1255 ntBASIC10.58□□□□□ -0.72
HIST1H2BDP58876 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC10.58□□□□□ -0.72
HIST1H2BDP58876 AC098650.1-201ENST00000635992 3535 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
HIST1H2BDP58876 SPTBN2-209ENST00000533211 8128 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
HIST1H2BDP58876 SLC22A12-204ENST00000377574 3206 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
HIST1H2BDP58876 SMIM10L1-201ENST00000622602 4795 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
HIST1H2BDP58876 ACSL6-207ENST00000379264 6539 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
HIST1H2BDP58876 ALOX5-201ENST00000374391 2506 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
HIST1H2BDP58876 PIK3CD-202ENST00000377346 5203 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
HIST1H2BDP58876 CPSF6-201ENST00000266679 2229 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
HIST1H2BDP58876 LINC00473-205ENST00000584911 2212 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
HIST1H2BDP58876 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC10.58□□□□□ -0.72
HIST1H2BDP58876 NKAP-201ENST00000371410 5963 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
HIST1H2BDP58876 AC104590.1-202ENST00000558368 1921 ntBASIC10.58□□□□□ -0.72
HIST1H2BDP58876 LOXHD1-204ENST00000398705 1824 ntTSL 2 BASIC10.58□□□□□ -0.72
HIST1H2BDP58876 TREH-202ENST00000397925 1718 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
HIST1H2BDP58876 TNRC6C-207ENST00000588847 8527 ntAPPRIS P4 TSL 5 BASIC10.58□□□□□ -0.72
HIST1H2BDP58876 FDXACB1-201ENST00000260257 2789 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
HIST1H2BDP58876 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC10.58□□□□□ -0.72
HIST1H2BDP58876 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC10.58□□□□□ -0.72
HIST1H2BDP58876 SETD1B-204ENST00000619791 5901 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
HIST1H2BDP58876 UBTF-209ENST00000529383 2570 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
HIST1H2BDP58876 LINC00969-213ENST00000445707 2363 ntTSL 2 BASIC10.58□□□□□ -0.72
HIST1H2BDP58876 WDR24-202ENST00000293883 3245 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
HIST1H2BDP58876 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC10.58□□□□□ -0.72
HIST1H2BDP58876 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC10.58□□□□□ -0.72
HIST1H2BDP58876 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
HIST1H2BDP58876 AL162727.1-201ENST00000437712 3043 ntTSL 2 BASIC10.58□□□□□ -0.72
HIST1H2BDP58876 ST8SIA1-203ENST00000396037 9714 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
HIST1H2BDP58876 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
HIST1H2BDP58876 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC10.57□□□□□ -0.72
HIST1H2BDP58876 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
HIST1H2BDP58876 MIR22HG-208ENST00000574306 2626 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
HIST1H2BDP58876 ZNF501-201ENST00000396048 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
HIST1H2BDP58876 LINC01134-203ENST00000442673 3059 ntTSL 2 BASIC10.57□□□□□ -0.72
HIST1H2BDP58876 HEXIM1-201ENST00000332499 3600 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
HIST1H2BDP58876 SLC25A24-203ENST00000565488 4271 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
HIST1H2BDP58876 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC10.57□□□□□ -0.72
HIST1H2BDP58876 LRPAP1-202ENST00000500728 7819 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
HIST1H2BDP58876 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
HIST1H2BDP58876 FAM78A-202ENST00000372269 3659 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
HIST1H2BDP58876 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
HIST1H2BDP58876 CICP9-201ENST00000444451 1913 ntBASIC10.57□□□□□ -0.72
HIST1H2BDP58876 PAN3-AS1-201ENST00000563843 1351 ntBASIC10.57□□□□□ -0.72
HIST1H2BDP58876 MYO7A-205ENST00000458637 7336 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
HIST1H2BDP58876 NPNT-202ENST00000379987 4598 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
HIST1H2BDP58876 QSOX1-202ENST00000367602 9311 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
HIST1H2BDP58876 USP38-201ENST00000307017 7009 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
HIST1H2BDP58876 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
HIST1H2BDP58876 DMTF1-201ENST00000331242 3801 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
HIST1H2BDP58876 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC10.57□□□□□ -0.72
HIST1H2BDP58876 RPF1-202ENST00000370656 724 ntTSL 2 BASIC10.57□□□□□ -0.72
HIST1H2BDP58876 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC10.57□□□□□ -0.72
HIST1H2BDP58876 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
HIST1H2BDP58876 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
HIST1H2BDP58876 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC10.57□□□□□ -0.72
HIST1H2BDP58876 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC10.57□□□□□ -0.72
HIST1H2BDP58876 AL137013.1-201ENST00000432946 1228 ntBASIC10.57□□□□□ -0.72
HIST1H2BDP58876 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC10.57□□□□□ -0.72
HIST1H2BDP58876 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms