Protein–RNA interactions for Protein: P48788

TNNI2, Troponin I, fast skeletal muscle, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI2P48788 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
TNNI2P48788 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
TNNI2P48788 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
TNNI2P48788 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TNNI2P48788 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TNNI2P48788 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC16.74■□□□□ 0.27
TNNI2P48788 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TNNI2P48788 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TNNI2P48788 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC16.74■□□□□ 0.27
TNNI2P48788 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC16.74■□□□□ 0.27
TNNI2P48788 KRT18P46-201ENST00000435568 1279 ntBASIC16.74■□□□□ 0.27
TNNI2P48788 KRT18P15-201ENST00000458108 1291 ntBASIC16.74■□□□□ 0.27
TNNI2P48788 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TNNI2P48788 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC16.74■□□□□ 0.27
TNNI2P48788 EEF1GP8-201ENST00000506566 1154 ntBASIC16.74■□□□□ 0.27
TNNI2P48788 AC093300.1-201ENST00000510368 1201 ntBASIC16.74■□□□□ 0.27
TNNI2P48788 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC16.74■□□□□ 0.27
TNNI2P48788 CES1P2-201ENST00000566467 1242 ntBASIC16.74■□□□□ 0.27
TNNI2P48788 NT5C-204ENST00000578337 582 ntTSL 2 BASIC16.74■□□□□ 0.27
TNNI2P48788 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC16.74■□□□□ 0.27
TNNI2P48788 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC16.74■□□□□ 0.27
TNNI2P48788 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC16.74■□□□□ 0.27
TNNI2P48788 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC16.74■□□□□ 0.27
TNNI2P48788 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TNNI2P48788 AL109809.1-201ENST00000418979 1367 ntBASIC16.74■□□□□ 0.27
TNNI2P48788 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TNNI2P48788 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
TNNI2P48788 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TNNI2P48788 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TNNI2P48788 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TNNI2P48788 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC16.73■□□□□ 0.27
TNNI2P48788 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TNNI2P48788 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC16.73■□□□□ 0.27
TNNI2P48788 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
TNNI2P48788 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC16.73■□□□□ 0.27
TNNI2P48788 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC16.73■□□□□ 0.27
TNNI2P48788 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TNNI2P48788 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC16.73■□□□□ 0.27
TNNI2P48788 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TNNI2P48788 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
TNNI2P48788 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
TNNI2P48788 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TNNI2P48788 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TNNI2P48788 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TNNI2P48788 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
TNNI2P48788 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TNNI2P48788 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TNNI2P48788 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
TNNI2P48788 HMGA1P1-201ENST00000415560 1062 ntBASIC16.73■□□□□ 0.27
TNNI2P48788 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC16.73■□□□□ 0.27
TNNI2P48788 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC16.73■□□□□ 0.27
TNNI2P48788 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC16.73■□□□□ 0.27
TNNI2P48788 BPIFB5P-201ENST00000457066 1099 ntBASIC16.73■□□□□ 0.27
TNNI2P48788 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC16.73■□□□□ 0.27
TNNI2P48788 TPT1P11-201ENST00000458482 498 ntBASIC16.73■□□□□ 0.27
TNNI2P48788 AC026470.1-201ENST00000478038 846 ntBASIC16.73■□□□□ 0.27
TNNI2P48788 PFN2-212ENST00000490975 858 ntTSL 4 BASIC16.73■□□□□ 0.27
TNNI2P48788 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC16.73■□□□□ 0.27
TNNI2P48788 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC16.73■□□□□ 0.27
TNNI2P48788 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC16.73■□□□□ 0.27
TNNI2P48788 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC16.73■□□□□ 0.27
TNNI2P48788 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC16.73■□□□□ 0.27
TNNI2P48788 AL118516.1-201ENST00000564152 670 ntBASIC16.73■□□□□ 0.27
TNNI2P48788 THY1-209ENST00000580275 578 ntTSL 3 BASIC16.73■□□□□ 0.27
TNNI2P48788 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC16.73■□□□□ 0.27
TNNI2P48788 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC16.73■□□□□ 0.27
TNNI2P48788 AC006548.2-201ENST00000605217 529 ntBASIC16.73■□□□□ 0.27
TNNI2P48788 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TNNI2P48788 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC16.73■□□□□ 0.27
TNNI2P48788 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
TNNI2P48788 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TNNI2P48788 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TNNI2P48788 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC16.73■□□□□ 0.27
TNNI2P48788 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TNNI2P48788 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC16.73■□□□□ 0.27
TNNI2P48788 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
TNNI2P48788 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TNNI2P48788 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC16.73■□□□□ 0.27
TNNI2P48788 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC16.73■□□□□ 0.27
TNNI2P48788 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TNNI2P48788 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TNNI2P48788 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
TNNI2P48788 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TNNI2P48788 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
TNNI2P48788 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TNNI2P48788 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
TNNI2P48788 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC16.73■□□□□ 0.27
TNNI2P48788 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TNNI2P48788 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TNNI2P48788 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TNNI2P48788 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC16.72■□□□□ 0.27
TNNI2P48788 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TNNI2P48788 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TNNI2P48788 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
TNNI2P48788 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TNNI2P48788 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TNNI2P48788 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TNNI2P48788 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TNNI2P48788 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TNNI2P48788 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms