Protein–RNA interactions for Protein: P41229

KDM5C, Lysine-specific demethylase 5C, humanhuman

Predictions only

Length 1,560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5CP41229 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
KDM5CP41229 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC20.48■□□□□ 0.87
KDM5CP41229 AL591806.3-201ENST00000289779 2096 ntAPPRIS P5 TSL 2 BASIC20.48■□□□□ 0.87
KDM5CP41229 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
KDM5CP41229 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
KDM5CP41229 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
KDM5CP41229 HSPA7-201ENST00000445535 1927 ntBASIC20.48■□□□□ 0.87
KDM5CP41229 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
KDM5CP41229 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
KDM5CP41229 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC20.48■□□□□ 0.87
KDM5CP41229 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
KDM5CP41229 ANAPC15-203ENST00000502597 1481 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
KDM5CP41229 EDDM3B-201ENST00000326783 896 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
KDM5CP41229 LINC00388-201ENST00000412714 663 ntTSL 5 BASIC20.47■□□□□ 0.87
KDM5CP41229 AP001331.1-201ENST00000413008 1015 ntBASIC20.47■□□□□ 0.87
KDM5CP41229 AC090696.1-201ENST00000419100 418 ntTSL 3 BASIC20.47■□□□□ 0.87
KDM5CP41229 RBMX2P5-201ENST00000424312 969 ntBASIC20.47■□□□□ 0.87
KDM5CP41229 GTF2I-203ENST00000443166 979 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
KDM5CP41229 RPL35P1-201ENST00000450819 370 ntBASIC20.47■□□□□ 0.87
KDM5CP41229 RN7SL794P-201ENST00000469816 280 ntBASIC20.47■□□□□ 0.87
KDM5CP41229 AF186996.6-201ENST00000485294 149 ntBASIC20.47■□□□□ 0.87
KDM5CP41229 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
KDM5CP41229 LINC00643-202ENST00000553426 526 ntTSL 3 BASIC20.47■□□□□ 0.87
KDM5CP41229 Metazoa_SRP.147-201ENST00000576563 312 ntBASIC20.47■□□□□ 0.87
KDM5CP41229 LIMD2-210ENST00000582055 509 ntTSL 2 BASIC20.47■□□□□ 0.87
KDM5CP41229 HLA-DQA1-201ENST00000343139 1591 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
KDM5CP41229 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
KDM5CP41229 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
KDM5CP41229 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC20.47■□□□□ 0.87
KDM5CP41229 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
KDM5CP41229 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
KDM5CP41229 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
KDM5CP41229 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
KDM5CP41229 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC20.47■□□□□ 0.87
KDM5CP41229 ELP4-223ENST00000640342 1392 ntTSL 5 BASIC20.47■□□□□ 0.87
KDM5CP41229 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC20.47■□□□□ 0.87
KDM5CP41229 MCOLN3-201ENST00000341115 1762 ntTSL 2 BASIC20.47■□□□□ 0.87
KDM5CP41229 EEF1G-201ENST00000329251 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
KDM5CP41229 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
KDM5CP41229 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC20.47■□□□□ 0.87
KDM5CP41229 TXLNGY-202ENST00000407724 1000 ntTSL 3 BASIC20.46■□□□□ 0.87
KDM5CP41229 AL162151.1-201ENST00000423922 561 ntTSL 4 BASIC20.46■□□□□ 0.87
KDM5CP41229 AC010997.2-201ENST00000427610 260 ntTSL 3 BASIC20.46■□□□□ 0.87
KDM5CP41229 AC078882.1-201ENST00000436132 416 ntTSL 2 BASIC20.46■□□□□ 0.87
KDM5CP41229 AL355500.1-201ENST00000439421 297 ntTSL 3 BASIC20.46■□□□□ 0.87
KDM5CP41229 RNASEH2CP1-201ENST00000454281 502 ntBASIC20.46■□□□□ 0.87
KDM5CP41229 RN7SL838P-201ENST00000481676 295 ntBASIC20.46■□□□□ 0.87
KDM5CP41229 AC103724.2-201ENST00000520355 476 ntBASIC20.46■□□□□ 0.87
KDM5CP41229 AL161668.2-201ENST00000531638 492 ntTSL 5 BASIC20.46■□□□□ 0.87
KDM5CP41229 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
KDM5CP41229 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
KDM5CP41229 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
KDM5CP41229 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
KDM5CP41229 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
KDM5CP41229 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
KDM5CP41229 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
KDM5CP41229 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
KDM5CP41229 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
KDM5CP41229 OS9-207ENST00000439210 1946 ntTSL 2 BASIC20.46■□□□□ 0.87
KDM5CP41229 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
KDM5CP41229 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
KDM5CP41229 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
KDM5CP41229 AL031056.1-202ENST00000635954 2193 ntTSL 5 BASIC20.46■□□□□ 0.87
KDM5CP41229 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
KDM5CP41229 CTRL-205ENST00000574481 1721 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
KDM5CP41229 SEPT10-208ENST00000437928 1782 ntTSL 5 BASIC20.46■□□□□ 0.87
KDM5CP41229 SLC25A5-201ENST00000317881 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
KDM5CP41229 ZCCHC7-201ENST00000322831 1219 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
KDM5CP41229 ATP5J-204ENST00000400093 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
KDM5CP41229 ZNF32-AS2-201ENST00000418966 905 ntTSL 5 BASIC20.46■□□□□ 0.87
KDM5CP41229 CYP4F29P-202ENST00000428301 1279 ntTSL 2 BASIC20.46■□□□□ 0.87
KDM5CP41229 KRT18P42-201ENST00000505048 1255 ntBASIC20.46■□□□□ 0.87
KDM5CP41229 AC025576.1-201ENST00000536455 462 ntTSL 5 BASIC20.46■□□□□ 0.87
KDM5CP41229 MST1L-204ENST00000545160 559 ntTSL 4 BASIC20.46■□□□□ 0.87
KDM5CP41229 NAA38-204ENST00000575208 529 ntTSL 3 BASIC20.46■□□□□ 0.87
KDM5CP41229 TUBB4A-207ENST00000596926 548 ntTSL 4 BASIC20.46■□□□□ 0.87
KDM5CP41229 AC112220.4-201ENST00000604982 1263 ntBASIC20.46■□□□□ 0.87
KDM5CP41229 NRSN2-206ENST00000608736 712 ntTSL 3 BASIC20.46■□□□□ 0.87
KDM5CP41229 AC079779.4-201ENST00000619113 548 ntTSL 5 BASIC20.46■□□□□ 0.87
KDM5CP41229 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC20.46■□□□□ 0.87
KDM5CP41229 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
KDM5CP41229 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
KDM5CP41229 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
KDM5CP41229 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
KDM5CP41229 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
KDM5CP41229 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
KDM5CP41229 RCC2P5-201ENST00000492126 1487 ntBASIC20.45■□□□□ 0.86
KDM5CP41229 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC20.45■□□□□ 0.86
KDM5CP41229 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
KDM5CP41229 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC20.45■□□□□ 0.86
KDM5CP41229 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
KDM5CP41229 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
KDM5CP41229 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
KDM5CP41229 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
KDM5CP41229 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
KDM5CP41229 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
KDM5CP41229 AL357033.2-201ENST00000430184 739 ntTSL 3 BASIC20.45■□□□□ 0.86
KDM5CP41229 HDHD5-AS1-202ENST00000431923 616 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
KDM5CP41229 C3orf84-201ENST00000432035 669 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
KDM5CP41229 AP000959.1-201ENST00000441759 977 ntTSL 3 BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms