Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
KRT9P35527 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
KRT9P35527 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC15.56■□□□□ 0.08
KRT9P35527 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
KRT9P35527 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
KRT9P35527 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
KRT9P35527 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
KRT9P35527 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
KRT9P35527 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC15.56■□□□□ 0.08
KRT9P35527 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
KRT9P35527 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC15.56■□□□□ 0.08
KRT9P35527 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
KRT9P35527 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
KRT9P35527 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
KRT9P35527 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC15.56■□□□□ 0.08
KRT9P35527 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
KRT9P35527 AP002761.4-201ENST00000565433 3361 ntBASIC15.56■□□□□ 0.08
KRT9P35527 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC15.56■□□□□ 0.08
KRT9P35527 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
KRT9P35527 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
KRT9P35527 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC15.56■□□□□ 0.08
KRT9P35527 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
KRT9P35527 RBM38-204ENST00000371219 760 ntTSL 2 BASIC15.56■□□□□ 0.08
KRT9P35527 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
KRT9P35527 STX1A-203ENST00000395155 783 ntTSL 2 BASIC15.56■□□□□ 0.08
KRT9P35527 HLA-V-201ENST00000429037 534 ntBASIC15.56■□□□□ 0.08
KRT9P35527 YBX1P6-201ENST00000442962 1002 ntBASIC15.56■□□□□ 0.08
KRT9P35527 AC100850.1-201ENST00000506768 649 ntBASIC15.56■□□□□ 0.08
KRT9P35527 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
KRT9P35527 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
KRT9P35527 AP005482.1-201ENST00000563722 1273 ntBASIC15.56■□□□□ 0.08
KRT9P35527 DUX4L46-201ENST00000566845 751 ntBASIC15.56■□□□□ 0.08
KRT9P35527 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
KRT9P35527 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
KRT9P35527 AC133552.6-201ENST00000613406 534 ntBASIC15.56■□□□□ 0.08
KRT9P35527 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
KRT9P35527 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
KRT9P35527 LAP3P2-201ENST00000454686 1454 ntBASIC15.56■□□□□ 0.08
KRT9P35527 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
KRT9P35527 ABCD1P2-201ENST00000429313 1601 ntBASIC15.56■□□□□ 0.08
KRT9P35527 FAS-202ENST00000352159 1722 ntTSL 5 BASIC15.56■□□□□ 0.08
KRT9P35527 AL023775.1-201ENST00000454907 1746 ntBASIC15.56■□□□□ 0.08
KRT9P35527 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC15.56■□□□□ 0.08
KRT9P35527 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
KRT9P35527 AC004623.1-201ENST00000624592 2127 ntBASIC15.56■□□□□ 0.08
KRT9P35527 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
KRT9P35527 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
KRT9P35527 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC15.56■□□□□ 0.08
KRT9P35527 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
KRT9P35527 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC15.56■□□□□ 0.08
KRT9P35527 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
KRT9P35527 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
KRT9P35527 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
KRT9P35527 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
KRT9P35527 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC15.55■□□□□ 0.08
KRT9P35527 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
KRT9P35527 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
KRT9P35527 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
KRT9P35527 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC15.55■□□□□ 0.08
KRT9P35527 PCDHB18P-202ENST00000526308 3197 ntBASIC15.55■□□□□ 0.08
KRT9P35527 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC15.55■□□□□ 0.08
KRT9P35527 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC15.55■□□□□ 0.08
KRT9P35527 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
KRT9P35527 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
KRT9P35527 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
KRT9P35527 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
KRT9P35527 E2F3P2-201ENST00000447755 1422 ntBASIC15.55■□□□□ 0.08
KRT9P35527 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
KRT9P35527 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC15.55■□□□□ 0.08
KRT9P35527 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
KRT9P35527 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC15.55■□□□□ 0.08
KRT9P35527 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC15.55■□□□□ 0.08
KRT9P35527 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC15.55■□□□□ 0.08
KRT9P35527 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC15.55■□□□□ 0.08
KRT9P35527 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
KRT9P35527 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC15.55■□□□□ 0.08
KRT9P35527 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC15.55■□□□□ 0.08
KRT9P35527 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
KRT9P35527 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
KRT9P35527 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC15.55■□□□□ 0.08
KRT9P35527 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC15.55■□□□□ 0.08
KRT9P35527 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC15.55■□□□□ 0.08
KRT9P35527 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
KRT9P35527 AC017083.2-201ENST00000608069 979 ntBASIC15.55■□□□□ 0.08
KRT9P35527 AC244157.2-201ENST00000616239 1006 ntBASIC15.55■□□□□ 0.08
KRT9P35527 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
KRT9P35527 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
KRT9P35527 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
KRT9P35527 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
KRT9P35527 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
KRT9P35527 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
KRT9P35527 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
KRT9P35527 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC15.55■□□□□ 0.08
KRT9P35527 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
KRT9P35527 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC15.55■□□□□ 0.08
KRT9P35527 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
KRT9P35527 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
KRT9P35527 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
KRT9P35527 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC15.55■□□□□ 0.08
KRT9P35527 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms