Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
CD28P10747 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC11.13□□□□□ -0.63
CD28P10747 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
CD28P10747 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC11.13□□□□□ -0.63
CD28P10747 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CD28P10747 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
CD28P10747 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CD28P10747 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC11.13□□□□□ -0.63
CD28P10747 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
CD28P10747 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC11.13□□□□□ -0.63
CD28P10747 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC11.13□□□□□ -0.63
CD28P10747 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC11.13□□□□□ -0.63
CD28P10747 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CD28P10747 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CD28P10747 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC11.13□□□□□ -0.63
CD28P10747 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CD28P10747 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC11.13□□□□□ -0.63
CD28P10747 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CD28P10747 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CD28P10747 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC11.12□□□□□ -0.63
CD28P10747 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC11.12□□□□□ -0.63
CD28P10747 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
CD28P10747 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
CD28P10747 TEKT4P2-202ENST00000559466 1312 ntBASIC11.12□□□□□ -0.63
CD28P10747 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC11.12□□□□□ -0.63
CD28P10747 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC11.12□□□□□ -0.63
CD28P10747 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
CD28P10747 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC11.12□□□□□ -0.63
CD28P10747 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
CD28P10747 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CD28P10747 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CD28P10747 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC11.12□□□□□ -0.63
CD28P10747 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC11.12□□□□□ -0.63
CD28P10747 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC11.12□□□□□ -0.63
CD28P10747 AGGF1P1-201ENST00000509500 2073 ntBASIC11.12□□□□□ -0.63
CD28P10747 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC11.12□□□□□ -0.63
CD28P10747 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CD28P10747 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CD28P10747 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CD28P10747 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC11.12□□□□□ -0.63
CD28P10747 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CD28P10747 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
CD28P10747 LINC00552-201ENST00000625151 2579 ntBASIC11.12□□□□□ -0.63
CD28P10747 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC11.12□□□□□ -0.63
CD28P10747 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
CD28P10747 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CD28P10747 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC11.12□□□□□ -0.63
CD28P10747 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
CD28P10747 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CD28P10747 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CD28P10747 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
CD28P10747 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CD28P10747 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC11.12□□□□□ -0.63
CD28P10747 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC11.12□□□□□ -0.63
CD28P10747 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
CD28P10747 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC11.12□□□□□ -0.63
CD28P10747 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC11.12□□□□□ -0.63
CD28P10747 AL354861.1-201ENST00000445213 355 ntBASIC11.12□□□□□ -0.63
CD28P10747 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC11.12□□□□□ -0.63
CD28P10747 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC11.12□□□□□ -0.63
CD28P10747 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
CD28P10747 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC11.12□□□□□ -0.63
CD28P10747 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC11.12□□□□□ -0.63
CD28P10747 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC11.12□□□□□ -0.63
CD28P10747 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
CD28P10747 CR383656.3-201ENST00000551315 183 ntBASIC11.12□□□□□ -0.63
CD28P10747 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
CD28P10747 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC11.12□□□□□ -0.63
CD28P10747 ELP5-212ENST00000574255 671 ntTSL 2 BASIC11.12□□□□□ -0.63
CD28P10747 SKA2-205ENST00000580541 689 ntTSL 3 BASIC11.12□□□□□ -0.63
CD28P10747 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
CD28P10747 RN7SL470P-201ENST00000583069 259 ntBASIC11.12□□□□□ -0.63
CD28P10747 AP000322.3-201ENST00000608665 388 ntBASIC11.12□□□□□ -0.63
CD28P10747 HLA-C-210ENST00000640219 976 ntBASIC11.12□□□□□ -0.63
CD28P10747 AL390755.1-201ENST00000623716 2027 ntBASIC11.12□□□□□ -0.63
CD28P10747 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
CD28P10747 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
CD28P10747 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
CD28P10747 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
CD28P10747 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CD28P10747 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
CD28P10747 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CD28P10747 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CD28P10747 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CD28P10747 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CD28P10747 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC11.12□□□□□ -0.63
CD28P10747 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CD28P10747 FGD5P1-202ENST00000614866 2498 ntBASIC11.12□□□□□ -0.63
CD28P10747 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
CD28P10747 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
CD28P10747 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
CD28P10747 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
CD28P10747 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
CD28P10747 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CD28P10747 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
CD28P10747 COCH-203ENST00000460581 2688 ntTSL 2 BASIC11.12□□□□□ -0.63
CD28P10747 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CD28P10747 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC11.12□□□□□ -0.63
CD28P10747 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
CD28P10747 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms