Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
IFNA1P01562 TNFSF8-201ENST00000223795 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
IFNA1P01562 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC11.25□□□□□ -0.61
IFNA1P01562 FAN1-201ENST00000362065 4891 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
IFNA1P01562 F10-203ENST00000409306 1450 ntTSL 3 BASIC11.25□□□□□ -0.61
IFNA1P01562 AC061965.1-201ENST00000560524 1465 ntBASIC11.25□□□□□ -0.61
IFNA1P01562 SPART-203ENST00000451493 4944 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
IFNA1P01562 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC11.25□□□□□ -0.61
IFNA1P01562 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
IFNA1P01562 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
IFNA1P01562 AC005014.1-201ENST00000432006 2976 ntBASIC11.25□□□□□ -0.61
IFNA1P01562 MYO10-210ENST00000513610 8038 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
IFNA1P01562 MAP7-208ENST00000617204 4536 ntAPPRIS ALT2 TSL 2 BASIC11.25□□□□□ -0.61
IFNA1P01562 NEXMIF-201ENST00000055682 11719 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
IFNA1P01562 ZNF799-202ENST00000430385 2583 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
IFNA1P01562 SPG11-201ENST00000261866 7774 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
IFNA1P01562 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
IFNA1P01562 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC11.24□□□□□ -0.61
IFNA1P01562 AL031714.1-202ENST00000568106 3107 ntTSL 5 BASIC11.24□□□□□ -0.61
IFNA1P01562 CPNE4-201ENST00000429747 4184 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
IFNA1P01562 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC11.24□□□□□ -0.61
IFNA1P01562 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC11.24□□□□□ -0.61
IFNA1P01562 AC104758.3-203ENST00000562938 2123 ntBASIC11.24□□□□□ -0.61
IFNA1P01562 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
IFNA1P01562 MAD1L1-201ENST00000265854 2718 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
IFNA1P01562 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
IFNA1P01562 SV2A-202ENST00000369146 4416 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
IFNA1P01562 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC11.24□□□□□ -0.61
IFNA1P01562 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
IFNA1P01562 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC11.24□□□□□ -0.61
IFNA1P01562 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
IFNA1P01562 AC008132.1-203ENST00000412938 5920 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
IFNA1P01562 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
IFNA1P01562 PLEC-210ENST00000527096 13713 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
IFNA1P01562 RPS15-201ENST00000233609 534 ntTSL 2 BASIC11.24□□□□□ -0.61
IFNA1P01562 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC11.24□□□□□ -0.61
IFNA1P01562 SP3-201ENST00000310015 6359 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
IFNA1P01562 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
IFNA1P01562 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
IFNA1P01562 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
IFNA1P01562 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC11.24□□□□□ -0.61
IFNA1P01562 CD81-202ENST00000381036 880 ntTSL 3 BASIC11.24□□□□□ -0.61
IFNA1P01562 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC11.24□□□□□ -0.61
IFNA1P01562 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
IFNA1P01562 AL080243.2-201ENST00000418783 582 ntBASIC11.24□□□□□ -0.61
IFNA1P01562 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC11.24□□□□□ -0.61
IFNA1P01562 PPIE-208ENST00000470213 927 ntTSL 3 BASIC11.24□□□□□ -0.61
IFNA1P01562 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC11.24□□□□□ -0.61
IFNA1P01562 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
IFNA1P01562 PP7080-204ENST00000510714 601 ntTSL 3 BASIC11.24□□□□□ -0.61
IFNA1P01562 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC11.24□□□□□ -0.61
IFNA1P01562 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC11.24□□□□□ -0.61
IFNA1P01562 RPS15-205ENST00000586686 562 ntTSL 5 BASIC11.24□□□□□ -0.61
IFNA1P01562 RPS15-208ENST00000591804 711 ntTSL 5 BASIC11.24□□□□□ -0.61
IFNA1P01562 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
IFNA1P01562 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC11.24□□□□□ -0.61
IFNA1P01562 CITED2-204ENST00000618718 901 ntTSL 2 BASIC11.24□□□□□ -0.61
IFNA1P01562 BX539320.1-201ENST00000623759 877 ntBASIC11.24□□□□□ -0.61
IFNA1P01562 PRSS30P-206ENST00000641773 873 ntBASIC11.24□□□□□ -0.61
IFNA1P01562 TRMT61A-202ENST00000389749 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
IFNA1P01562 NRP1-208ENST00000395995 5826 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
IFNA1P01562 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
IFNA1P01562 AL138725.1-201ENST00000407347 1314 ntBASIC11.24□□□□□ -0.61
IFNA1P01562 DDX5-210ENST00000578804 2021 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
IFNA1P01562 COL6A2-204ENST00000409416 3430 ntTSL 5 BASIC11.24□□□□□ -0.61
IFNA1P01562 PPT1-204ENST00000439754 2195 ntTSL 3 BASIC11.24□□□□□ -0.61
IFNA1P01562 PALLD-209ENST00000507735 4379 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
IFNA1P01562 DDX12P-201ENST00000432996 2947 ntBASIC11.24□□□□□ -0.61
IFNA1P01562 BTNL8-201ENST00000231229 2229 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
IFNA1P01562 ZCCHC12-201ENST00000310164 2231 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
IFNA1P01562 SFTPA1-202ENST00000419470 2210 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
IFNA1P01562 RNF125-201ENST00000217740 6020 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
IFNA1P01562 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
IFNA1P01562 DHODH-205ENST00000572887 4824 ntAPPRIS ALT1 TSL 5 BASIC11.24□□□□□ -0.61
IFNA1P01562 AGAP5-202ENST00000443782 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
IFNA1P01562 AGAP4-203ENST00000448048 2439 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
IFNA1P01562 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC11.24□□□□□ -0.61
IFNA1P01562 NUDT9-203ENST00000473942 2458 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
IFNA1P01562 PLA1A-206ENST00000495992 1695 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
IFNA1P01562 GALNT6-202ENST00000543196 5207 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
IFNA1P01562 DGKZ-216ENST00000528615 2692 ntTSL 5 BASIC11.23□□□□□ -0.61
IFNA1P01562 AC004147.4-201ENST00000636421 1844 ntTSL 5 BASIC11.23□□□□□ -0.61
IFNA1P01562 PDZRN3-208ENST00000479530 2778 ntTSL 2 BASIC11.23□□□□□ -0.61
IFNA1P01562 ZFR-201ENST00000265069 4738 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
IFNA1P01562 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
IFNA1P01562 LAMB3-201ENST00000356082 4055 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
IFNA1P01562 RC3H2-201ENST00000335387 3081 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
IFNA1P01562 BIVM-ERCC5-204ENST00000639132 5195 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
IFNA1P01562 P2RY8-201ENST00000381297 4198 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
IFNA1P01562 ZNF774-201ENST00000354377 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
IFNA1P01562 AC124319.4-201ENST00000622931 2161 ntBASIC11.23□□□□□ -0.61
IFNA1P01562 DOCK3-201ENST00000266037 8755 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
IFNA1P01562 LINC01301-202ENST00000506428 2444 ntTSL 2 BASIC11.23□□□□□ -0.61
IFNA1P01562 LINC00638-201ENST00000555578 2518 ntBASIC11.23□□□□□ -0.61
IFNA1P01562 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
IFNA1P01562 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
IFNA1P01562 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
IFNA1P01562 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
IFNA1P01562 KRT18P32-201ENST00000424695 1287 ntBASIC11.23□□□□□ -0.61
IFNA1P01562 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms