Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC11.97□□□□□ -0.49
KCNIP3Q9Y2W7 KRT42P-202ENST00000438131 2895 ntTSL 2 BASIC11.97□□□□□ -0.49
KCNIP3Q9Y2W7 FAM118A-201ENST00000216214 3458 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
KCNIP3Q9Y2W7 EXOC5-202ENST00000413566 8513 ntTSL 5 BASIC11.96□□□□□ -0.49
KCNIP3Q9Y2W7 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC11.96□□□□□ -0.49
KCNIP3Q9Y2W7 PCNX4-202ENST00000391611 4073 ntTSL 2 BASIC11.96□□□□□ -0.49
KCNIP3Q9Y2W7 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
KCNIP3Q9Y2W7 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
KCNIP3Q9Y2W7 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
KCNIP3Q9Y2W7 AGER-206ENST00000375070 1463 ntTSL 5 BASIC11.96□□□□□ -0.49
KCNIP3Q9Y2W7 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
KCNIP3Q9Y2W7 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
KCNIP3Q9Y2W7 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
KCNIP3Q9Y2W7 GATAD2A-201ENST00000358713 5510 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
KCNIP3Q9Y2W7 CREBL2-201ENST00000228865 3754 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
KCNIP3Q9Y2W7 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
KCNIP3Q9Y2W7 AC009093.10-201ENST00000641956 1442 ntBASIC11.96□□□□□ -0.49
KCNIP3Q9Y2W7 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC11.96□□□□□ -0.49
KCNIP3Q9Y2W7 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
KCNIP3Q9Y2W7 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
KCNIP3Q9Y2W7 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
KCNIP3Q9Y2W7 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
KCNIP3Q9Y2W7 ALK-205ENST00000618119 4646 ntTSL 5 BASIC11.96□□□□□ -0.49
KCNIP3Q9Y2W7 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
KCNIP3Q9Y2W7 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
KCNIP3Q9Y2W7 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
KCNIP3Q9Y2W7 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
KCNIP3Q9Y2W7 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
KCNIP3Q9Y2W7 SYK-204ENST00000375754 5005 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
KCNIP3Q9Y2W7 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC11.96□□□□□ -0.49
KCNIP3Q9Y2W7 ARHGAP21-217ENST00000612832 5514 ntTSL 5 BASIC11.96□□□□□ -0.49
KCNIP3Q9Y2W7 BCL2L13-202ENST00000337612 4905 ntTSL 2 BASIC11.96□□□□□ -0.49
KCNIP3Q9Y2W7 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
KCNIP3Q9Y2W7 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
KCNIP3Q9Y2W7 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
KCNIP3Q9Y2W7 SOCS2P1-201ENST00000417727 557 ntBASIC11.96□□□□□ -0.49
KCNIP3Q9Y2W7 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC11.96□□□□□ -0.49
KCNIP3Q9Y2W7 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC11.96□□□□□ -0.49
KCNIP3Q9Y2W7 AC097493.3-201ENST00000509725 367 ntBASIC11.96□□□□□ -0.49
KCNIP3Q9Y2W7 SNHG9-202ENST00000564014 471 ntBASIC11.96□□□□□ -0.49
KCNIP3Q9Y2W7 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC11.96□□□□□ -0.49
KCNIP3Q9Y2W7 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC11.96□□□□□ -0.49
KCNIP3Q9Y2W7 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC11.96□□□□□ -0.49
KCNIP3Q9Y2W7 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC11.96□□□□□ -0.49
KCNIP3Q9Y2W7 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
KCNIP3Q9Y2W7 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
KCNIP3Q9Y2W7 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
KCNIP3Q9Y2W7 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
KCNIP3Q9Y2W7 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
KCNIP3Q9Y2W7 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC11.96□□□□□ -0.5
KCNIP3Q9Y2W7 ESYT3-202ENST00000389567 4407 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
KCNIP3Q9Y2W7 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC11.96□□□□□ -0.5
KCNIP3Q9Y2W7 BCORL1-205ENST00000540052 7127 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
KCNIP3Q9Y2W7 DYNC1LI1-201ENST00000273130 2504 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
KCNIP3Q9Y2W7 MKX-201ENST00000375790 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
KCNIP3Q9Y2W7 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC11.96□□□□□ -0.5
KCNIP3Q9Y2W7 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
KCNIP3Q9Y2W7 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC11.96□□□□□ -0.5
KCNIP3Q9Y2W7 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
KCNIP3Q9Y2W7 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
KCNIP3Q9Y2W7 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.5
KCNIP3Q9Y2W7 ZNF106-205ENST00000565611 5081 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
KCNIP3Q9Y2W7 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
KCNIP3Q9Y2W7 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
KCNIP3Q9Y2W7 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
KCNIP3Q9Y2W7 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
KCNIP3Q9Y2W7 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
KCNIP3Q9Y2W7 PDIA3P1-201ENST00000471856 1510 ntBASIC11.96□□□□□ -0.5
KCNIP3Q9Y2W7 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC11.96□□□□□ -0.5
KCNIP3Q9Y2W7 Z98257.2-202ENST00000641138 1548 ntBASIC11.96□□□□□ -0.5
KCNIP3Q9Y2W7 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC11.96□□□□□ -0.5
KCNIP3Q9Y2W7 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
KCNIP3Q9Y2W7 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.5
KCNIP3Q9Y2W7 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
KCNIP3Q9Y2W7 MCL1-204ENST00000620947 3626 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
KCNIP3Q9Y2W7 ZBTB7B-203ENST00000417934 4017 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
KCNIP3Q9Y2W7 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
KCNIP3Q9Y2W7 CMIP-208ENST00000566462 3512 ntTSL 4 BASIC11.95□□□□□ -0.5
KCNIP3Q9Y2W7 AC010970.1-201ENST00000445125 1848 ntBASIC11.95□□□□□ -0.5
KCNIP3Q9Y2W7 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
KCNIP3Q9Y2W7 PCDHGB1-201ENST00000523390 4590 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
KCNIP3Q9Y2W7 MARCH3-201ENST00000308660 4196 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
KCNIP3Q9Y2W7 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
KCNIP3Q9Y2W7 POU2F2-216ENST00000560558 3282 ntTSL 5 BASIC11.95□□□□□ -0.5
KCNIP3Q9Y2W7 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC11.95□□□□□ -0.5
KCNIP3Q9Y2W7 AP000437.1-201ENST00000624057 2085 ntBASIC11.95□□□□□ -0.5
KCNIP3Q9Y2W7 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC11.95□□□□□ -0.5
KCNIP3Q9Y2W7 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
KCNIP3Q9Y2W7 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
KCNIP3Q9Y2W7 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
KCNIP3Q9Y2W7 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
KCNIP3Q9Y2W7 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
KCNIP3Q9Y2W7 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
KCNIP3Q9Y2W7 RASL12-203ENST00000434605 982 ntTSL 2 BASIC11.95□□□□□ -0.5
KCNIP3Q9Y2W7 AC009477.1-201ENST00000452936 217 ntBASIC11.95□□□□□ -0.5
KCNIP3Q9Y2W7 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
KCNIP3Q9Y2W7 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC11.95□□□□□ -0.5
KCNIP3Q9Y2W7 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
KCNIP3Q9Y2W7 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC11.95□□□□□ -0.5
KCNIP3Q9Y2W7 MESTP3-201ENST00000503460 968 ntBASIC11.95□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms