Protein–RNA interactions for Protein: Q9Y2S0

POLR1D, DNA-directed RNA polymerases I and III subunit RPAC2, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1DQ9Y2S0 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
POLR1DQ9Y2S0 TNN-202ENST00000621086 4234 ntTSL 5 BASIC12.76□□□□□ -0.37
POLR1DQ9Y2S0 USP40-201ENST00000251722 5692 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
POLR1DQ9Y2S0 VWA8-203ENST00000379310 7147 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
POLR1DQ9Y2S0 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
POLR1DQ9Y2S0 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
POLR1DQ9Y2S0 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
POLR1DQ9Y2S0 DHX38-201ENST00000268482 4608 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
POLR1DQ9Y2S0 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
POLR1DQ9Y2S0 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
POLR1DQ9Y2S0 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
POLR1DQ9Y2S0 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
POLR1DQ9Y2S0 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC12.76□□□□□ -0.37
POLR1DQ9Y2S0 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
POLR1DQ9Y2S0 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
POLR1DQ9Y2S0 MBLAC2-202ENST00000514906 1936 ntBASIC12.76□□□□□ -0.37
POLR1DQ9Y2S0 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC12.76□□□□□ -0.37
POLR1DQ9Y2S0 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
POLR1DQ9Y2S0 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
POLR1DQ9Y2S0 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC12.76□□□□□ -0.37
POLR1DQ9Y2S0 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
POLR1DQ9Y2S0 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC12.76□□□□□ -0.37
POLR1DQ9Y2S0 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
POLR1DQ9Y2S0 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC12.75□□□□□ -0.37
POLR1DQ9Y2S0 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
POLR1DQ9Y2S0 VSTM4-202ENST00000332853 6392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
POLR1DQ9Y2S0 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
POLR1DQ9Y2S0 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
POLR1DQ9Y2S0 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
POLR1DQ9Y2S0 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
POLR1DQ9Y2S0 KCND1-201ENST00000218176 4437 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
POLR1DQ9Y2S0 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
POLR1DQ9Y2S0 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
POLR1DQ9Y2S0 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
POLR1DQ9Y2S0 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
POLR1DQ9Y2S0 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
POLR1DQ9Y2S0 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
POLR1DQ9Y2S0 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
POLR1DQ9Y2S0 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
POLR1DQ9Y2S0 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
POLR1DQ9Y2S0 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC12.75□□□□□ -0.37
POLR1DQ9Y2S0 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC12.75□□□□□ -0.37
POLR1DQ9Y2S0 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
POLR1DQ9Y2S0 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
POLR1DQ9Y2S0 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC12.75□□□□□ -0.37
POLR1DQ9Y2S0 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
POLR1DQ9Y2S0 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC12.75□□□□□ -0.37
POLR1DQ9Y2S0 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC12.75□□□□□ -0.37
POLR1DQ9Y2S0 TISP43-201ENST00000409793 538 ntTSL 4 BASIC12.75□□□□□ -0.37
POLR1DQ9Y2S0 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
POLR1DQ9Y2S0 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC12.75□□□□□ -0.37
POLR1DQ9Y2S0 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
POLR1DQ9Y2S0 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC12.75□□□□□ -0.37
POLR1DQ9Y2S0 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
POLR1DQ9Y2S0 AC244394.1-201ENST00000435000 1665 ntBASIC12.75□□□□□ -0.37
POLR1DQ9Y2S0 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC12.75□□□□□ -0.37
POLR1DQ9Y2S0 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC12.75□□□□□ -0.37
POLR1DQ9Y2S0 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC12.75□□□□□ -0.37
POLR1DQ9Y2S0 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
POLR1DQ9Y2S0 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
POLR1DQ9Y2S0 AC100850.1-201ENST00000506768 649 ntBASIC12.75□□□□□ -0.37
POLR1DQ9Y2S0 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC12.75□□□□□ -0.37
POLR1DQ9Y2S0 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC12.75□□□□□ -0.37
POLR1DQ9Y2S0 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
POLR1DQ9Y2S0 AC244157.2-201ENST00000616239 1006 ntBASIC12.75□□□□□ -0.37
POLR1DQ9Y2S0 MAPT-IT1-201ENST00000624111 3016 ntBASIC12.75□□□□□ -0.37
POLR1DQ9Y2S0 HSPA12A-205ENST00000635765 5841 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
POLR1DQ9Y2S0 TMBIM7P-202ENST00000641474 1516 ntBASIC12.75□□□□□ -0.37
POLR1DQ9Y2S0 DYSF-202ENST00000394120 6543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
POLR1DQ9Y2S0 KIF21B-204ENST00000461742 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
POLR1DQ9Y2S0 SNRK-201ENST00000296088 5183 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
POLR1DQ9Y2S0 NRXN1-210ENST00000406316 9375 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
POLR1DQ9Y2S0 NFATC1-203ENST00000329101 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
POLR1DQ9Y2S0 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
POLR1DQ9Y2S0 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
POLR1DQ9Y2S0 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
POLR1DQ9Y2S0 AC130686.1-201ENST00000622936 2466 ntBASIC12.74□□□□□ -0.37
POLR1DQ9Y2S0 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
POLR1DQ9Y2S0 ERCC6L2-201ENST00000288985 4564 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
POLR1DQ9Y2S0 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
POLR1DQ9Y2S0 AC089987.1-201ENST00000551654 2209 ntBASIC12.74□□□□□ -0.37
POLR1DQ9Y2S0 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
POLR1DQ9Y2S0 HLCS-207ENST00000612277 6112 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
POLR1DQ9Y2S0 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
POLR1DQ9Y2S0 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
POLR1DQ9Y2S0 FBN3-201ENST00000270509 9232 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
POLR1DQ9Y2S0 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
POLR1DQ9Y2S0 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
POLR1DQ9Y2S0 L1CAM-202ENST00000361981 5004 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
POLR1DQ9Y2S0 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
POLR1DQ9Y2S0 IST1-203ENST00000378799 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
POLR1DQ9Y2S0 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC12.74□□□□□ -0.37
POLR1DQ9Y2S0 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC12.74□□□□□ -0.37
POLR1DQ9Y2S0 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
POLR1DQ9Y2S0 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
POLR1DQ9Y2S0 LAP3P2-201ENST00000454686 1454 ntBASIC12.74□□□□□ -0.37
POLR1DQ9Y2S0 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC12.74□□□□□ -0.37
POLR1DQ9Y2S0 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
POLR1DQ9Y2S0 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
POLR1DQ9Y2S0 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms