Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
PARPBPQ9NWS1 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC12.8□□□□□ -0.36
PARPBPQ9NWS1 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
PARPBPQ9NWS1 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
PARPBPQ9NWS1 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
PARPBPQ9NWS1 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC12.8□□□□□ -0.36
PARPBPQ9NWS1 TUBBP5-203ENST00000508529 1334 ntBASIC12.8□□□□□ -0.36
PARPBPQ9NWS1 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
PARPBPQ9NWS1 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC12.8□□□□□ -0.36
PARPBPQ9NWS1 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PARPBPQ9NWS1 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC12.8□□□□□ -0.36
PARPBPQ9NWS1 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
PARPBPQ9NWS1 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
PARPBPQ9NWS1 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
PARPBPQ9NWS1 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC12.8□□□□□ -0.36
PARPBPQ9NWS1 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
PARPBPQ9NWS1 AL157791.1-201ENST00000553667 1699 ntBASIC12.8□□□□□ -0.36
PARPBPQ9NWS1 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC12.8□□□□□ -0.36
PARPBPQ9NWS1 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC12.8□□□□□ -0.36
PARPBPQ9NWS1 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
PARPBPQ9NWS1 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
PARPBPQ9NWS1 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
PARPBPQ9NWS1 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
PARPBPQ9NWS1 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
PARPBPQ9NWS1 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
PARPBPQ9NWS1 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PARPBPQ9NWS1 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
PARPBPQ9NWS1 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
PARPBPQ9NWS1 STK26-204ENST00000481105 1835 ntTSL 2 BASIC12.79□□□□□ -0.36
PARPBPQ9NWS1 TCAM1P-207ENST00000485295 1537 ntBASIC12.79□□□□□ -0.36
PARPBPQ9NWS1 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC12.79□□□□□ -0.36
PARPBPQ9NWS1 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC12.79□□□□□ -0.36
PARPBPQ9NWS1 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PARPBPQ9NWS1 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC12.79□□□□□ -0.36
PARPBPQ9NWS1 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
PARPBPQ9NWS1 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
PARPBPQ9NWS1 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC12.79□□□□□ -0.36
PARPBPQ9NWS1 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
PARPBPQ9NWS1 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PARPBPQ9NWS1 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
PARPBPQ9NWS1 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
PARPBPQ9NWS1 MIR769-201ENST00000390225 118 ntBASIC12.79□□□□□ -0.36
PARPBPQ9NWS1 HNRNPA1P41-201ENST00000397777 928 ntBASIC12.79□□□□□ -0.36
PARPBPQ9NWS1 TSPY25P-201ENST00000429463 745 ntBASIC12.79□□□□□ -0.36
PARPBPQ9NWS1 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC12.79□□□□□ -0.36
PARPBPQ9NWS1 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC12.79□□□□□ -0.36
PARPBPQ9NWS1 AC099548.2-209ENST00000480264 625 ntBASIC12.79□□□□□ -0.36
PARPBPQ9NWS1 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
PARPBPQ9NWS1 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC12.79□□□□□ -0.36
PARPBPQ9NWS1 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC12.79□□□□□ -0.36
PARPBPQ9NWS1 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC12.79□□□□□ -0.36
PARPBPQ9NWS1 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
PARPBPQ9NWS1 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC12.79□□□□□ -0.36
PARPBPQ9NWS1 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC12.79□□□□□ -0.36
PARPBPQ9NWS1 MIR6787-201ENST00000616675 61 ntBASIC12.79□□□□□ -0.36
PARPBPQ9NWS1 DDX5-235ENST00000630471 473 ntTSL 4 BASIC12.79□□□□□ -0.36
PARPBPQ9NWS1 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
PARPBPQ9NWS1 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC12.79□□□□□ -0.36
PARPBPQ9NWS1 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC12.79□□□□□ -0.36
PARPBPQ9NWS1 TMEM168-201ENST00000312814 7470 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PARPBPQ9NWS1 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PARPBPQ9NWS1 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
PARPBPQ9NWS1 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
PARPBPQ9NWS1 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
PARPBPQ9NWS1 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
PARPBPQ9NWS1 APP-205ENST00000358918 2366 ntTSL 5 BASIC12.79□□□□□ -0.36
PARPBPQ9NWS1 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC12.79□□□□□ -0.36
PARPBPQ9NWS1 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
PARPBPQ9NWS1 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
PARPBPQ9NWS1 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PARPBPQ9NWS1 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
PARPBPQ9NWS1 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
PARPBPQ9NWS1 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PARPBPQ9NWS1 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
PARPBPQ9NWS1 GOLGA8VP-201ENST00000559009 1798 ntBASIC12.79□□□□□ -0.36
PARPBPQ9NWS1 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
PARPBPQ9NWS1 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
PARPBPQ9NWS1 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PARPBPQ9NWS1 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PARPBPQ9NWS1 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PARPBPQ9NWS1 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC12.79□□□□□ -0.36
PARPBPQ9NWS1 AC016582.3-202ENST00000443870 6580 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
PARPBPQ9NWS1 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC12.78□□□□□ -0.36
PARPBPQ9NWS1 KRT8P21-201ENST00000430398 1491 ntBASIC12.78□□□□□ -0.36
PARPBPQ9NWS1 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
PARPBPQ9NWS1 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC12.78□□□□□ -0.36
PARPBPQ9NWS1 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PARPBPQ9NWS1 HSPA7-201ENST00000445535 1927 ntBASIC12.78□□□□□ -0.36
PARPBPQ9NWS1 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC12.78□□□□□ -0.36
PARPBPQ9NWS1 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PARPBPQ9NWS1 CICP17-201ENST00000418553 2377 ntBASIC12.78□□□□□ -0.36
PARPBPQ9NWS1 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PARPBPQ9NWS1 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
PARPBPQ9NWS1 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
PARPBPQ9NWS1 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
PARPBPQ9NWS1 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
PARPBPQ9NWS1 WNT5A-201ENST00000264634 6176 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PARPBPQ9NWS1 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PARPBPQ9NWS1 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
PARPBPQ9NWS1 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms