Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
VGLL1Q99990 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
VGLL1Q99990 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
VGLL1Q99990 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC10.85□□□□□ -0.67
VGLL1Q99990 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
VGLL1Q99990 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
VGLL1Q99990 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC10.85□□□□□ -0.67
VGLL1Q99990 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
VGLL1Q99990 CAMSAP1-202ENST00000389532 7696 ntAPPRIS P2 TSL 5 BASIC10.85□□□□□ -0.67
VGLL1Q99990 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
VGLL1Q99990 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
VGLL1Q99990 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
VGLL1Q99990 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
VGLL1Q99990 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
VGLL1Q99990 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
VGLL1Q99990 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
VGLL1Q99990 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
VGLL1Q99990 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
VGLL1Q99990 GOLGA8EP-201ENST00000530246 1959 ntBASIC10.85□□□□□ -0.67
VGLL1Q99990 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
VGLL1Q99990 CHD3-203ENST00000380358 7356 ntTSL 2 BASIC10.84□□□□□ -0.67
VGLL1Q99990 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
VGLL1Q99990 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC10.84□□□□□ -0.67
VGLL1Q99990 PITPNM3-202ENST00000421306 6945 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
VGLL1Q99990 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC10.84□□□□□ -0.67
VGLL1Q99990 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
VGLL1Q99990 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
VGLL1Q99990 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
VGLL1Q99990 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC10.84□□□□□ -0.67
VGLL1Q99990 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
VGLL1Q99990 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC10.84□□□□□ -0.67
VGLL1Q99990 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
VGLL1Q99990 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC10.84□□□□□ -0.67
VGLL1Q99990 BRPF3-201ENST00000339717 4820 ntTSL 5 BASIC10.84□□□□□ -0.67
VGLL1Q99990 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC10.84□□□□□ -0.67
VGLL1Q99990 EXOC8-201ENST00000366645 5100 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
VGLL1Q99990 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC10.84□□□□□ -0.67
VGLL1Q99990 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
VGLL1Q99990 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
VGLL1Q99990 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
VGLL1Q99990 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
VGLL1Q99990 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
VGLL1Q99990 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
VGLL1Q99990 RPF1-202ENST00000370656 724 ntTSL 2 BASIC10.84□□□□□ -0.67
VGLL1Q99990 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
VGLL1Q99990 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
VGLL1Q99990 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
VGLL1Q99990 DGCR5-201ENST00000399539 862 ntBASIC10.84□□□□□ -0.67
VGLL1Q99990 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
VGLL1Q99990 PIN1P1-201ENST00000412108 996 ntBASIC10.84□□□□□ -0.67
VGLL1Q99990 GOLGA6L11P-201ENST00000417252 1298 ntBASIC10.84□□□□□ -0.67
VGLL1Q99990 CD8B2-202ENST00000417670 633 ntBASIC10.84□□□□□ -0.67
VGLL1Q99990 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC10.84□□□□□ -0.67
VGLL1Q99990 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC10.84□□□□□ -0.67
VGLL1Q99990 GAS5-209ENST00000430245 723 ntTSL 3 BASIC10.84□□□□□ -0.67
VGLL1Q99990 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC10.84□□□□□ -0.67
VGLL1Q99990 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC10.84□□□□□ -0.67
VGLL1Q99990 AL035414.1-201ENST00000451327 857 ntBASIC10.84□□□□□ -0.67
VGLL1Q99990 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC10.84□□□□□ -0.67
VGLL1Q99990 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC10.84□□□□□ -0.67
VGLL1Q99990 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC10.84□□□□□ -0.67
VGLL1Q99990 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC10.84□□□□□ -0.67
VGLL1Q99990 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC10.84□□□□□ -0.67
VGLL1Q99990 AC025279.2-201ENST00000569730 653 ntBASIC10.84□□□□□ -0.67
VGLL1Q99990 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC10.84□□□□□ -0.67
VGLL1Q99990 GNRHR2-203ENST00000581100 1187 ntBASIC10.84□□□□□ -0.67
VGLL1Q99990 RN7SL204P-201ENST00000582831 262 ntBASIC10.84□□□□□ -0.67
VGLL1Q99990 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC10.84□□□□□ -0.67
VGLL1Q99990 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC10.84□□□□□ -0.67
VGLL1Q99990 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
VGLL1Q99990 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
VGLL1Q99990 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
VGLL1Q99990 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
VGLL1Q99990 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
VGLL1Q99990 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
VGLL1Q99990 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
VGLL1Q99990 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC10.84□□□□□ -0.67
VGLL1Q99990 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
VGLL1Q99990 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
VGLL1Q99990 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
VGLL1Q99990 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
VGLL1Q99990 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
VGLL1Q99990 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
VGLL1Q99990 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
VGLL1Q99990 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
VGLL1Q99990 TNRC6C-205ENST00000588061 8419 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
VGLL1Q99990 CIC-204ENST00000572681 8218 ntTSL 5 BASIC10.84□□□□□ -0.67
VGLL1Q99990 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
VGLL1Q99990 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
VGLL1Q99990 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
VGLL1Q99990 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC10.84□□□□□ -0.67
VGLL1Q99990 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC10.84□□□□□ -0.67
VGLL1Q99990 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
VGLL1Q99990 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
VGLL1Q99990 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
VGLL1Q99990 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
VGLL1Q99990 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
VGLL1Q99990 DNM1P41-201ENST00000623634 3350 ntBASIC10.83□□□□□ -0.67
VGLL1Q99990 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.67
VGLL1Q99990 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms