Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
VRK1Q99986 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
VRK1Q99986 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
VRK1Q99986 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VRK1Q99986 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VRK1Q99986 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
VRK1Q99986 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
VRK1Q99986 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
VRK1Q99986 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
VRK1Q99986 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
VRK1Q99986 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VRK1Q99986 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VRK1Q99986 SON-203ENST00000381679 7860 ntTSL 5 BASIC12.67□□□□□ -0.38
VRK1Q99986 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
VRK1Q99986 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
VRK1Q99986 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
VRK1Q99986 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
VRK1Q99986 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VRK1Q99986 JADE1-209ENST00000511647 3560 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
VRK1Q99986 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC12.67□□□□□ -0.38
VRK1Q99986 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VRK1Q99986 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC12.67□□□□□ -0.38
VRK1Q99986 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VRK1Q99986 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC12.67□□□□□ -0.38
VRK1Q99986 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VRK1Q99986 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC12.67□□□□□ -0.38
VRK1Q99986 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
VRK1Q99986 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
VRK1Q99986 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC12.67□□□□□ -0.38
VRK1Q99986 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
VRK1Q99986 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VRK1Q99986 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC12.67□□□□□ -0.38
VRK1Q99986 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC12.67□□□□□ -0.38
VRK1Q99986 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
VRK1Q99986 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VRK1Q99986 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
VRK1Q99986 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
VRK1Q99986 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC12.66□□□□□ -0.38
VRK1Q99986 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
VRK1Q99986 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
VRK1Q99986 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
VRK1Q99986 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VRK1Q99986 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
VRK1Q99986 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC12.66□□□□□ -0.38
VRK1Q99986 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VRK1Q99986 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC12.66□□□□□ -0.38
VRK1Q99986 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC12.66□□□□□ -0.38
VRK1Q99986 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
VRK1Q99986 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC12.66□□□□□ -0.38
VRK1Q99986 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
VRK1Q99986 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VRK1Q99986 SHC1P1-201ENST00000425230 1745 ntBASIC12.66□□□□□ -0.38
VRK1Q99986 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC12.66□□□□□ -0.38
VRK1Q99986 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VRK1Q99986 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
VRK1Q99986 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VRK1Q99986 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VRK1Q99986 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VRK1Q99986 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
VRK1Q99986 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
VRK1Q99986 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC12.66□□□□□ -0.38
VRK1Q99986 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC12.66□□□□□ -0.38
VRK1Q99986 NKAIN1P1-201ENST00000435754 582 ntBASIC12.66□□□□□ -0.38
VRK1Q99986 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC12.66□□□□□ -0.38
VRK1Q99986 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC12.66□□□□□ -0.38
VRK1Q99986 IGHJ2P-201ENST00000454480 60 ntBASIC12.66□□□□□ -0.38
VRK1Q99986 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC12.66□□□□□ -0.38
VRK1Q99986 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC12.66□□□□□ -0.38
VRK1Q99986 EID1-202ENST00000560490 584 ntTSL 3 BASIC12.66□□□□□ -0.38
VRK1Q99986 IGHV3OR16-16-201ENST00000563644 343 ntBASIC12.66□□□□□ -0.38
VRK1Q99986 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
VRK1Q99986 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC12.66□□□□□ -0.38
VRK1Q99986 NDUFV2P1-201ENST00000596415 907 ntBASIC12.66□□□□□ -0.38
VRK1Q99986 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC12.66□□□□□ -0.38
VRK1Q99986 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
VRK1Q99986 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
VRK1Q99986 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VRK1Q99986 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
VRK1Q99986 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
VRK1Q99986 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC12.66□□□□□ -0.38
VRK1Q99986 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC12.66□□□□□ -0.38
VRK1Q99986 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VRK1Q99986 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
VRK1Q99986 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
VRK1Q99986 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
VRK1Q99986 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VRK1Q99986 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
VRK1Q99986 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VRK1Q99986 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
VRK1Q99986 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
VRK1Q99986 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC12.65□□□□□ -0.38
VRK1Q99986 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
VRK1Q99986 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC12.65□□□□□ -0.38
VRK1Q99986 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
VRK1Q99986 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
VRK1Q99986 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VRK1Q99986 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VRK1Q99986 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VRK1Q99986 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VRK1Q99986 AC016397.2-201ENST00000624848 1985 ntBASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms