Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PDLIM5Q96HC4 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PDLIM5Q96HC4 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC13.81□□□□□ -0.2
PDLIM5Q96HC4 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
PDLIM5Q96HC4 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
PDLIM5Q96HC4 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PDLIM5Q96HC4 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
PDLIM5Q96HC4 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC13.81□□□□□ -0.2
PDLIM5Q96HC4 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
PDLIM5Q96HC4 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC13.81□□□□□ -0.2
PDLIM5Q96HC4 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
PDLIM5Q96HC4 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PDLIM5Q96HC4 ST20-AS1-201ENST00000560255 4223 ntBASIC13.81□□□□□ -0.2
PDLIM5Q96HC4 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PDLIM5Q96HC4 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC13.81□□□□□ -0.2
PDLIM5Q96HC4 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PDLIM5Q96HC4 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
PDLIM5Q96HC4 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
PDLIM5Q96HC4 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
PDLIM5Q96HC4 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
PDLIM5Q96HC4 ABR-205ENST00000544583 5595 ntTSL 2 BASIC13.81□□□□□ -0.2
PDLIM5Q96HC4 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
PDLIM5Q96HC4 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
PDLIM5Q96HC4 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PDLIM5Q96HC4 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
PDLIM5Q96HC4 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
PDLIM5Q96HC4 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PDLIM5Q96HC4 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PDLIM5Q96HC4 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PDLIM5Q96HC4 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
PDLIM5Q96HC4 AC239868.1-201ENST00000369385 493 ntBASIC13.81□□□□□ -0.2
PDLIM5Q96HC4 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
PDLIM5Q96HC4 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
PDLIM5Q96HC4 HNRNPA1P41-201ENST00000397777 928 ntBASIC13.81□□□□□ -0.2
PDLIM5Q96HC4 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC13.81□□□□□ -0.2
PDLIM5Q96HC4 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC13.81□□□□□ -0.2
PDLIM5Q96HC4 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PDLIM5Q96HC4 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC13.81□□□□□ -0.2
PDLIM5Q96HC4 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PDLIM5Q96HC4 PUDP-206ENST00000540122 825 ntTSL 2 BASIC13.81□□□□□ -0.2
PDLIM5Q96HC4 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC13.81□□□□□ -0.2
PDLIM5Q96HC4 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC13.81□□□□□ -0.2
PDLIM5Q96HC4 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC13.81□□□□□ -0.2
PDLIM5Q96HC4 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC13.81□□□□□ -0.2
PDLIM5Q96HC4 AC026740.1-201ENST00000607068 791 ntBASIC13.81□□□□□ -0.2
PDLIM5Q96HC4 AL022328.3-201ENST00000607943 679 ntBASIC13.81□□□□□ -0.2
PDLIM5Q96HC4 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC13.81□□□□□ -0.2
PDLIM5Q96HC4 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
PDLIM5Q96HC4 AC079336.7-201ENST00000623428 1078 ntBASIC13.81□□□□□ -0.2
PDLIM5Q96HC4 AC015967.2-201ENST00000624092 234 ntBASIC13.81□□□□□ -0.2
PDLIM5Q96HC4 AL161773.1-201ENST00000624845 863 ntBASIC13.81□□□□□ -0.2
PDLIM5Q96HC4 AC006435.4-201ENST00000625037 234 ntBASIC13.81□□□□□ -0.2
PDLIM5Q96HC4 AL356737.1-201ENST00000634391 234 ntBASIC13.81□□□□□ -0.2
PDLIM5Q96HC4 AL805961.1-203ENST00000641078 1258 ntBASIC13.81□□□□□ -0.2
PDLIM5Q96HC4 NAP1L6-202ENST00000641404 1222 ntBASIC13.81□□□□□ -0.2
PDLIM5Q96HC4 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
PDLIM5Q96HC4 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
PDLIM5Q96HC4 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC13.81□□□□□ -0.2
PDLIM5Q96HC4 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PDLIM5Q96HC4 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PDLIM5Q96HC4 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
PDLIM5Q96HC4 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PDLIM5Q96HC4 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC13.81□□□□□ -0.2
PDLIM5Q96HC4 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.81□□□□□ -0.2
PDLIM5Q96HC4 AL358781.1-202ENST00000321081 1360 ntBASIC13.81□□□□□ -0.2
PDLIM5Q96HC4 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC13.81□□□□□ -0.2
PDLIM5Q96HC4 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PDLIM5Q96HC4 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
PDLIM5Q96HC4 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC13.81□□□□□ -0.2
PDLIM5Q96HC4 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
PDLIM5Q96HC4 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
PDLIM5Q96HC4 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC13.8□□□□□ -0.2
PDLIM5Q96HC4 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PDLIM5Q96HC4 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
PDLIM5Q96HC4 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
PDLIM5Q96HC4 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC13.8□□□□□ -0.2
PDLIM5Q96HC4 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC13.8□□□□□ -0.2
PDLIM5Q96HC4 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC13.8□□□□□ -0.2
PDLIM5Q96HC4 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PDLIM5Q96HC4 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.8□□□□□ -0.2
PDLIM5Q96HC4 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
PDLIM5Q96HC4 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
PDLIM5Q96HC4 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PDLIM5Q96HC4 AC067931.2-201ENST00000623655 2003 ntBASIC13.8□□□□□ -0.2
PDLIM5Q96HC4 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PDLIM5Q96HC4 NME1-209ENST00000511355 1645 ntTSL 5 BASIC13.8□□□□□ -0.2
PDLIM5Q96HC4 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
PDLIM5Q96HC4 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PDLIM5Q96HC4 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PDLIM5Q96HC4 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PDLIM5Q96HC4 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PDLIM5Q96HC4 AL008707.1-201ENST00000422498 534 ntBASIC13.8□□□□□ -0.2
PDLIM5Q96HC4 AC136604.1-202ENST00000425471 771 ntBASIC13.8□□□□□ -0.2
PDLIM5Q96HC4 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC13.8□□□□□ -0.2
PDLIM5Q96HC4 ACTBP11-201ENST00000436287 1126 ntBASIC13.8□□□□□ -0.2
PDLIM5Q96HC4 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC13.8□□□□□ -0.2
PDLIM5Q96HC4 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC13.8□□□□□ -0.2
PDLIM5Q96HC4 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PDLIM5Q96HC4 ELP5-212ENST00000574255 671 ntTSL 2 BASIC13.8□□□□□ -0.2
PDLIM5Q96HC4 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms