Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 MAD1L1-201ENST00000265854 2718 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
AP3S1Q92572 NAV1-203ENST00000367302 9685 ntTSL 5 BASIC12.54□□□□□ -0.4
AP3S1Q92572 NBPF1-203ENST00000430580 5932 ntAPPRIS P5 TSL 5 BASIC12.54□□□□□ -0.4
AP3S1Q92572 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
AP3S1Q92572 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
AP3S1Q92572 ZNF239-205ENST00000535642 1904 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
AP3S1Q92572 LINC00638-201ENST00000555578 2518 ntBASIC12.54□□□□□ -0.4
AP3S1Q92572 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
AP3S1Q92572 AC018445.4-201ENST00000624066 2291 ntBASIC12.54□□□□□ -0.4
AP3S1Q92572 AKNA-201ENST00000223791 4414 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
AP3S1Q92572 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
AP3S1Q92572 KRT8P28-201ENST00000433288 1390 ntBASIC12.54□□□□□ -0.4
AP3S1Q92572 H1FX-AS1-201ENST00000383461 2600 ntTSL 2 BASIC12.54□□□□□ -0.4
AP3S1Q92572 PLCB3-201ENST00000279230 4197 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
AP3S1Q92572 SHC1P1-201ENST00000425230 1745 ntBASIC12.54□□□□□ -0.4
AP3S1Q92572 DGKZ-216ENST00000528615 2692 ntTSL 5 BASIC12.54□□□□□ -0.4
AP3S1Q92572 KIF3A-208ENST00000618515 3333 ntTSL 5 BASIC12.54□□□□□ -0.4
AP3S1Q92572 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
AP3S1Q92572 STARD13-202ENST00000336934 5917 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
AP3S1Q92572 ALDH7A1-234ENST00000637782 1773 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
AP3S1Q92572 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
AP3S1Q92572 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC12.53□□□□□ -0.4
AP3S1Q92572 SPTB-203ENST00000389721 6705 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
AP3S1Q92572 ZKSCAN3-203ENST00000377255 4799 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
AP3S1Q92572 OS9-203ENST00000389142 2457 ntTSL 5 BASIC12.53□□□□□ -0.4
AP3S1Q92572 NUDT9-203ENST00000473942 2458 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
AP3S1Q92572 RB1-201ENST00000267163 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
AP3S1Q92572 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC12.53□□□□□ -0.4
AP3S1Q92572 MYO9B-206ENST00000595618 7623 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
AP3S1Q92572 ZNF197-204ENST00000383745 2935 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
AP3S1Q92572 AOC4P-203ENST00000566825 2289 ntBASIC12.53□□□□□ -0.4
AP3S1Q92572 DGKZ-204ENST00000454345 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
AP3S1Q92572 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
AP3S1Q92572 SLC35A4-203ENST00000612662 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
AP3S1Q92572 UBE2W-201ENST00000419880 2315 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
AP3S1Q92572 GFRA1-203ENST00000369236 9109 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
AP3S1Q92572 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
AP3S1Q92572 AC020917.4-201ENST00000623994 1999 ntBASIC12.53□□□□□ -0.4
AP3S1Q92572 TGFBRAP1-203ENST00000595531 5595 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
AP3S1Q92572 OGFR-202ENST00000370461 4506 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
AP3S1Q92572 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
AP3S1Q92572 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
AP3S1Q92572 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
AP3S1Q92572 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
AP3S1Q92572 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
AP3S1Q92572 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC12.53□□□□□ -0.4
AP3S1Q92572 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC12.53□□□□□ -0.4
AP3S1Q92572 FO681548.1-201ENST00000455617 1132 ntBASIC12.53□□□□□ -0.4
AP3S1Q92572 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC12.53□□□□□ -0.4
AP3S1Q92572 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
AP3S1Q92572 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC12.53□□□□□ -0.4
AP3S1Q92572 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC12.53□□□□□ -0.4
AP3S1Q92572 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC12.53□□□□□ -0.4
AP3S1Q92572 AL513210.1-201ENST00000629608 234 ntBASIC12.53□□□□□ -0.4
AP3S1Q92572 BCL2L13-202ENST00000337612 4905 ntTSL 2 BASIC12.53□□□□□ -0.4
AP3S1Q92572 SCAF8-203ENST00000417268 4944 ntTSL 2 BASIC12.53□□□□□ -0.4
AP3S1Q92572 FAM237B-201ENST00000637645 3877 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
AP3S1Q92572 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC12.53□□□□□ -0.4
AP3S1Q92572 AGAP5-202ENST00000443782 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
AP3S1Q92572 AGAP4-203ENST00000448048 2439 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
AP3S1Q92572 IKBKB-218ENST00000520835 2403 ntTSL 2 BASIC12.53□□□□□ -0.4
AP3S1Q92572 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
AP3S1Q92572 KCNN1-201ENST00000222249 3625 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
AP3S1Q92572 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC12.53□□□□□ -0.4
AP3S1Q92572 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC12.53□□□□□ -0.4
AP3S1Q92572 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
AP3S1Q92572 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
AP3S1Q92572 KNDC1-202ENST00000368571 3925 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
AP3S1Q92572 CACNA1G-219ENST00000507609 6849 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
AP3S1Q92572 AC244453.2-201ENST00000457996 3543 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
AP3S1Q92572 PER1-202ENST00000354903 3115 ntTSL 2 BASIC12.53□□□□□ -0.4
AP3S1Q92572 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC12.53□□□□□ -0.4
AP3S1Q92572 CD38-201ENST00000226279 5668 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
AP3S1Q92572 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
AP3S1Q92572 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
AP3S1Q92572 ZBED2-201ENST00000317012 2311 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
AP3S1Q92572 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.4
AP3S1Q92572 HDAC7-202ENST00000354334 4065 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
AP3S1Q92572 HDAC7-201ENST00000080059 4095 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
AP3S1Q92572 RNGTT-202ENST00000369485 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
AP3S1Q92572 PCDHGA9-201ENST00000573521 4605 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
AP3S1Q92572 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC12.52□□□□□ -0.4
AP3S1Q92572 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
AP3S1Q92572 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.4
AP3S1Q92572 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
AP3S1Q92572 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
AP3S1Q92572 PLA2G6-202ENST00000335539 3060 ntTSL 5 BASIC12.52□□□□□ -0.4
AP3S1Q92572 KIF17-202ENST00000375044 3572 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
AP3S1Q92572 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
AP3S1Q92572 MAP4K2-201ENST00000294066 7178 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
AP3S1Q92572 PHF19-202ENST00000373896 4241 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
AP3S1Q92572 MYRF-201ENST00000265460 5745 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
AP3S1Q92572 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
AP3S1Q92572 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
AP3S1Q92572 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
AP3S1Q92572 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
AP3S1Q92572 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
AP3S1Q92572 TEX30-203ENST00000376022 828 ntTSL 2 BASIC12.52□□□□□ -0.41
AP3S1Q92572 TEX30-205ENST00000376029 959 ntTSL 2 BASIC12.52□□□□□ -0.41
AP3S1Q92572 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms