Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCDC107Q8WV48 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCDC107Q8WV48 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCDC107Q8WV48 MFSD8-241ENST00000641686 4991 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
CCDC107Q8WV48 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC12.38□□□□□ -0.43
CCDC107Q8WV48 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCDC107Q8WV48 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCDC107Q8WV48 ZNF398-201ENST00000426851 5268 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CCDC107Q8WV48 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCDC107Q8WV48 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC12.37□□□□□ -0.43
CCDC107Q8WV48 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CCDC107Q8WV48 CLUHP2-201ENST00000426660 1303 ntBASIC12.37□□□□□ -0.43
CCDC107Q8WV48 FKBP4P6-201ENST00000457486 1332 ntBASIC12.37□□□□□ -0.43
CCDC107Q8WV48 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC12.37□□□□□ -0.43
CCDC107Q8WV48 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
CCDC107Q8WV48 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CCDC107Q8WV48 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CCDC107Q8WV48 STK25-235ENST00000543554 2556 ntTSL 2 BASIC12.37□□□□□ -0.43
CCDC107Q8WV48 SYNM-203ENST00000560674 5908 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CCDC107Q8WV48 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
CCDC107Q8WV48 INF2-202ENST00000330634 7578 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
CCDC107Q8WV48 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CCDC107Q8WV48 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC12.37□□□□□ -0.43
CCDC107Q8WV48 ZNF740-201ENST00000416904 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CCDC107Q8WV48 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CCDC107Q8WV48 BCL2L11-217ENST00000610735 5120 ntTSL 5 BASIC12.37□□□□□ -0.43
CCDC107Q8WV48 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CCDC107Q8WV48 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CCDC107Q8WV48 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CCDC107Q8WV48 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CCDC107Q8WV48 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC12.37□□□□□ -0.43
CCDC107Q8WV48 BAATP1-201ENST00000412284 1225 ntBASIC12.37□□□□□ -0.43
CCDC107Q8WV48 AC245100.3-201ENST00000441281 285 ntBASIC12.37□□□□□ -0.43
CCDC107Q8WV48 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CCDC107Q8WV48 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC12.37□□□□□ -0.43
CCDC107Q8WV48 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
CCDC107Q8WV48 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC12.37□□□□□ -0.43
CCDC107Q8WV48 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC12.37□□□□□ -0.43
CCDC107Q8WV48 TP53TG3HP-202ENST00000569755 579 ntBASIC12.37□□□□□ -0.43
CCDC107Q8WV48 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC12.37□□□□□ -0.43
CCDC107Q8WV48 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC12.37□□□□□ -0.43
CCDC107Q8WV48 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC12.37□□□□□ -0.43
CCDC107Q8WV48 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
CCDC107Q8WV48 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CCDC107Q8WV48 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CCDC107Q8WV48 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CCDC107Q8WV48 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
CCDC107Q8WV48 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC12.37□□□□□ -0.43
CCDC107Q8WV48 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC12.37□□□□□ -0.43
CCDC107Q8WV48 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC12.37□□□□□ -0.43
CCDC107Q8WV48 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
CCDC107Q8WV48 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC12.37□□□□□ -0.43
CCDC107Q8WV48 NCBP1-202ENST00000375147 5178 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CCDC107Q8WV48 CENPP-203ENST00000375587 8766 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CCDC107Q8WV48 AKAP13-202ENST00000394510 9128 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
CCDC107Q8WV48 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CCDC107Q8WV48 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC12.37□□□□□ -0.43
CCDC107Q8WV48 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CCDC107Q8WV48 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CCDC107Q8WV48 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CCDC107Q8WV48 PTCD1-201ENST00000292478 5582 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CCDC107Q8WV48 LMCD1-201ENST00000157600 8405 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CCDC107Q8WV48 Z98257.2-202ENST00000641138 1548 ntBASIC12.37□□□□□ -0.43
CCDC107Q8WV48 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CCDC107Q8WV48 SETD4-207ENST00000399215 4272 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
CCDC107Q8WV48 WNK1-202ENST00000340908 11208 ntTSL 5 BASIC12.36□□□□□ -0.43
CCDC107Q8WV48 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CCDC107Q8WV48 VPS13A-204ENST00000376634 10269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
CCDC107Q8WV48 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CCDC107Q8WV48 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
CCDC107Q8WV48 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
CCDC107Q8WV48 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
CCDC107Q8WV48 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CCDC107Q8WV48 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CCDC107Q8WV48 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CCDC107Q8WV48 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
CCDC107Q8WV48 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CCDC107Q8WV48 BRWD1-204ENST00000380800 7605 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CCDC107Q8WV48 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CCDC107Q8WV48 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
CCDC107Q8WV48 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CCDC107Q8WV48 C10orf105-202ENST00000441508 4836 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CCDC107Q8WV48 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
CCDC107Q8WV48 BCL2L13-214ENST00000543133 4975 ntTSL 2 BASIC12.36□□□□□ -0.43
CCDC107Q8WV48 BCL2L13-217ENST00000618481 4961 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
CCDC107Q8WV48 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC12.36□□□□□ -0.43
CCDC107Q8WV48 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CCDC107Q8WV48 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
CCDC107Q8WV48 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
CCDC107Q8WV48 RN7SKP230-201ENST00000365642 335 ntBASIC12.36□□□□□ -0.43
CCDC107Q8WV48 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC12.36□□□□□ -0.43
CCDC107Q8WV48 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CCDC107Q8WV48 SERF2-209ENST00000409646 559 ntTSL 4 BASIC12.36□□□□□ -0.43
CCDC107Q8WV48 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC12.36□□□□□ -0.43
CCDC107Q8WV48 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC12.36□□□□□ -0.43
CCDC107Q8WV48 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC12.36□□□□□ -0.43
CCDC107Q8WV48 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CCDC107Q8WV48 AC131206.1-201ENST00000538078 1211 ntBASIC12.36□□□□□ -0.43
CCDC107Q8WV48 PTP4A1P2-201ENST00000546033 454 ntBASIC12.36□□□□□ -0.43
CCDC107Q8WV48 PIGL-212ENST00000581006 554 ntTSL 4 BASIC12.36□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms