Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
BEST2Q8NFU1 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
BEST2Q8NFU1 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
BEST2Q8NFU1 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC15.22■□□□□ 0.03
BEST2Q8NFU1 AC008267.1-201ENST00000474858 1069 ntBASIC15.22■□□□□ 0.03
BEST2Q8NFU1 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC15.22■□□□□ 0.03
BEST2Q8NFU1 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
BEST2Q8NFU1 IQSEC3P1-201ENST00000538799 536 ntBASIC15.22■□□□□ 0.03
BEST2Q8NFU1 AC145285.5-201ENST00000562217 361 ntBASIC15.22■□□□□ 0.03
BEST2Q8NFU1 AL031713.1-201ENST00000564813 661 ntBASIC15.22■□□□□ 0.03
BEST2Q8NFU1 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
BEST2Q8NFU1 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
BEST2Q8NFU1 RN7SL555P-201ENST00000584742 339 ntBASIC15.22■□□□□ 0.03
BEST2Q8NFU1 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC15.22■□□□□ 0.03
BEST2Q8NFU1 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC15.22■□□□□ 0.03
BEST2Q8NFU1 AC242376.2-201ENST00000619355 883 ntBASIC15.22■□□□□ 0.03
BEST2Q8NFU1 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC15.22■□□□□ 0.03
BEST2Q8NFU1 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
BEST2Q8NFU1 LINC02486-201ENST00000604157 3000 ntBASIC15.22■□□□□ 0.03
BEST2Q8NFU1 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
BEST2Q8NFU1 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
BEST2Q8NFU1 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.22■□□□□ 0.03
BEST2Q8NFU1 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.22■□□□□ 0.03
BEST2Q8NFU1 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
BEST2Q8NFU1 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
BEST2Q8NFU1 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.22■□□□□ 0.03
BEST2Q8NFU1 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
BEST2Q8NFU1 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
BEST2Q8NFU1 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC15.22■□□□□ 0.03
BEST2Q8NFU1 DDC-213ENST00000617822 1809 ntTSL 3 BASIC15.22■□□□□ 0.03
BEST2Q8NFU1 AC068760.1-201ENST00000493579 1953 ntBASIC15.22■□□□□ 0.03
BEST2Q8NFU1 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC15.22■□□□□ 0.03
BEST2Q8NFU1 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
BEST2Q8NFU1 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC15.21■□□□□ 0.03
BEST2Q8NFU1 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
BEST2Q8NFU1 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
BEST2Q8NFU1 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC15.21■□□□□ 0.03
BEST2Q8NFU1 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC15.21■□□□□ 0.03
BEST2Q8NFU1 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
BEST2Q8NFU1 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
BEST2Q8NFU1 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC15.21■□□□□ 0.03
BEST2Q8NFU1 AC092978.1-202ENST00000637590 1327 ntBASIC15.21■□□□□ 0.03
BEST2Q8NFU1 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.21■□□□□ 0.03
BEST2Q8NFU1 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
BEST2Q8NFU1 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
BEST2Q8NFU1 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
BEST2Q8NFU1 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
BEST2Q8NFU1 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
BEST2Q8NFU1 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC15.21■□□□□ 0.03
BEST2Q8NFU1 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
BEST2Q8NFU1 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
BEST2Q8NFU1 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC15.21■□□□□ 0.03
BEST2Q8NFU1 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
BEST2Q8NFU1 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC15.21■□□□□ 0.03
BEST2Q8NFU1 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
BEST2Q8NFU1 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC15.21■□□□□ 0.03
BEST2Q8NFU1 HPGD-203ENST00000422112 805 ntTSL 2 BASIC15.21■□□□□ 0.03
BEST2Q8NFU1 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC15.21■□□□□ 0.03
BEST2Q8NFU1 AC078991.1-201ENST00000437297 610 ntBASIC15.21■□□□□ 0.03
BEST2Q8NFU1 ERP29P1-201ENST00000442902 706 ntBASIC15.21■□□□□ 0.03
BEST2Q8NFU1 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC15.21■□□□□ 0.03
BEST2Q8NFU1 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
BEST2Q8NFU1 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
BEST2Q8NFU1 MRPL22P1-201ENST00000505398 616 ntBASIC15.21■□□□□ 0.03
BEST2Q8NFU1 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC15.21■□□□□ 0.03
BEST2Q8NFU1 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
BEST2Q8NFU1 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC15.21■□□□□ 0.03
BEST2Q8NFU1 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC15.21■□□□□ 0.03
BEST2Q8NFU1 NPM1P43-201ENST00000558669 786 ntBASIC15.21■□□□□ 0.03
BEST2Q8NFU1 DNM1P30-201ENST00000563586 452 ntBASIC15.21■□□□□ 0.03
BEST2Q8NFU1 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC15.21■□□□□ 0.03
BEST2Q8NFU1 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC15.21■□□□□ 0.03
BEST2Q8NFU1 AC087045.2-201ENST00000606279 1003 ntBASIC15.21■□□□□ 0.03
BEST2Q8NFU1 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC15.21■□□□□ 0.03
BEST2Q8NFU1 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
BEST2Q8NFU1 COX6A1P2-201ENST00000620597 330 ntBASIC15.21■□□□□ 0.03
BEST2Q8NFU1 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
BEST2Q8NFU1 AC009145.4-201ENST00000625119 1294 ntBASIC15.21■□□□□ 0.03
BEST2Q8NFU1 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
BEST2Q8NFU1 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC15.21■□□□□ 0.03
BEST2Q8NFU1 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
BEST2Q8NFU1 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
BEST2Q8NFU1 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
BEST2Q8NFU1 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC15.21■□□□□ 0.03
BEST2Q8NFU1 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
BEST2Q8NFU1 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
BEST2Q8NFU1 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
BEST2Q8NFU1 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
BEST2Q8NFU1 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
BEST2Q8NFU1 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
BEST2Q8NFU1 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC15.2■□□□□ 0.02
BEST2Q8NFU1 AC004554.1-201ENST00000422830 1468 ntBASIC15.2■□□□□ 0.02
BEST2Q8NFU1 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
BEST2Q8NFU1 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC15.2■□□□□ 0.02
BEST2Q8NFU1 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
BEST2Q8NFU1 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
BEST2Q8NFU1 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC15.2■□□□□ 0.02
BEST2Q8NFU1 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
BEST2Q8NFU1 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC15.2■□□□□ 0.02
BEST2Q8NFU1 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms