Protein–RNA interactions for Protein: Q6P2S7

TTC41P, Putative tetratricopeptide repeat protein 41, humanhuman

Predictions only

Length 1,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC41PQ6P2S7 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TTC41PQ6P2S7 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TTC41PQ6P2S7 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
TTC41PQ6P2S7 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
TTC41PQ6P2S7 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TTC41PQ6P2S7 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TTC41PQ6P2S7 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TTC41PQ6P2S7 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC17.13■□□□□ 0.33
TTC41PQ6P2S7 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TTC41PQ6P2S7 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TTC41PQ6P2S7 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TTC41PQ6P2S7 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC17.13■□□□□ 0.33
TTC41PQ6P2S7 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TTC41PQ6P2S7 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC17.13■□□□□ 0.33
TTC41PQ6P2S7 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TTC41PQ6P2S7 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TTC41PQ6P2S7 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC17.13■□□□□ 0.33
TTC41PQ6P2S7 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TTC41PQ6P2S7 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
TTC41PQ6P2S7 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TTC41PQ6P2S7 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
TTC41PQ6P2S7 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TTC41PQ6P2S7 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TTC41PQ6P2S7 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TTC41PQ6P2S7 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TTC41PQ6P2S7 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TTC41PQ6P2S7 AP000358.1-201ENST00000456260 156 ntBASIC17.13■□□□□ 0.33
TTC41PQ6P2S7 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TTC41PQ6P2S7 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC17.13■□□□□ 0.33
TTC41PQ6P2S7 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC17.13■□□□□ 0.33
TTC41PQ6P2S7 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC17.13■□□□□ 0.33
TTC41PQ6P2S7 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TTC41PQ6P2S7 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TTC41PQ6P2S7 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC17.13■□□□□ 0.33
TTC41PQ6P2S7 CU633904.3-201ENST00000624042 1029 ntBASIC17.13■□□□□ 0.33
TTC41PQ6P2S7 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC17.13■□□□□ 0.33
TTC41PQ6P2S7 HADH-202ENST00000403312 1752 ntTSL 5 BASIC17.13■□□□□ 0.33
TTC41PQ6P2S7 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TTC41PQ6P2S7 AC020917.4-201ENST00000623994 1999 ntBASIC17.13■□□□□ 0.33
TTC41PQ6P2S7 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TTC41PQ6P2S7 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TTC41PQ6P2S7 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TTC41PQ6P2S7 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TTC41PQ6P2S7 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC17.12■□□□□ 0.33
TTC41PQ6P2S7 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC17.12■□□□□ 0.33
TTC41PQ6P2S7 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC17.12■□□□□ 0.33
TTC41PQ6P2S7 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
TTC41PQ6P2S7 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TTC41PQ6P2S7 TBC1D27-202ENST00000424239 1573 ntBASIC17.12■□□□□ 0.33
TTC41PQ6P2S7 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
TTC41PQ6P2S7 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TTC41PQ6P2S7 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TTC41PQ6P2S7 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TTC41PQ6P2S7 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TTC41PQ6P2S7 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TTC41PQ6P2S7 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TTC41PQ6P2S7 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC17.12■□□□□ 0.33
TTC41PQ6P2S7 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TTC41PQ6P2S7 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TTC41PQ6P2S7 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
TTC41PQ6P2S7 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC17.12■□□□□ 0.33
TTC41PQ6P2S7 CD81-209ENST00000492627 886 ntTSL 3 BASIC17.12■□□□□ 0.33
TTC41PQ6P2S7 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC17.12■□□□□ 0.33
TTC41PQ6P2S7 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TTC41PQ6P2S7 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
TTC41PQ6P2S7 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TTC41PQ6P2S7 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC17.12■□□□□ 0.33
TTC41PQ6P2S7 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
TTC41PQ6P2S7 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC17.12■□□□□ 0.33
TTC41PQ6P2S7 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TTC41PQ6P2S7 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
TTC41PQ6P2S7 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TTC41PQ6P2S7 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC17.12■□□□□ 0.33
TTC41PQ6P2S7 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TTC41PQ6P2S7 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TTC41PQ6P2S7 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TTC41PQ6P2S7 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TTC41PQ6P2S7 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TTC41PQ6P2S7 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC17.12■□□□□ 0.33
TTC41PQ6P2S7 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TTC41PQ6P2S7 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TTC41PQ6P2S7 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
TTC41PQ6P2S7 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
TTC41PQ6P2S7 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
TTC41PQ6P2S7 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC17.11■□□□□ 0.33
TTC41PQ6P2S7 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TTC41PQ6P2S7 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TTC41PQ6P2S7 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
TTC41PQ6P2S7 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TTC41PQ6P2S7 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC17.11■□□□□ 0.33
TTC41PQ6P2S7 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TTC41PQ6P2S7 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TTC41PQ6P2S7 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TTC41PQ6P2S7 AC105206.1-202ENST00000314927 2368 ntBASIC17.11■□□□□ 0.33
TTC41PQ6P2S7 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
TTC41PQ6P2S7 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TTC41PQ6P2S7 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TTC41PQ6P2S7 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TTC41PQ6P2S7 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC17.11■□□□□ 0.33
TTC41PQ6P2S7 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms