Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
H3F3CQ6NXT2 AC103592.1-201ENST00000394513 664 ntBASIC13.15□□□□□ -0.3
H3F3CQ6NXT2 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC13.15□□□□□ -0.3
H3F3CQ6NXT2 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC13.15□□□□□ -0.3
H3F3CQ6NXT2 AC006987.1-201ENST00000413610 527 ntBASIC13.15□□□□□ -0.3
H3F3CQ6NXT2 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
H3F3CQ6NXT2 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
H3F3CQ6NXT2 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC13.15□□□□□ -0.3
H3F3CQ6NXT2 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
H3F3CQ6NXT2 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC13.15□□□□□ -0.3
H3F3CQ6NXT2 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC13.15□□□□□ -0.3
H3F3CQ6NXT2 RN7SL555P-201ENST00000584742 339 ntBASIC13.15□□□□□ -0.3
H3F3CQ6NXT2 RPL17P45-201ENST00000586289 509 ntBASIC13.15□□□□□ -0.3
H3F3CQ6NXT2 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
H3F3CQ6NXT2 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
H3F3CQ6NXT2 AL133467.4-201ENST00000602953 725 ntBASIC13.15□□□□□ -0.3
H3F3CQ6NXT2 AC087392.5-201ENST00000612517 489 ntBASIC13.15□□□□□ -0.3
H3F3CQ6NXT2 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
H3F3CQ6NXT2 SNX1-214ENST00000625244 324 ntTSL 5 BASIC13.15□□□□□ -0.3
H3F3CQ6NXT2 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
H3F3CQ6NXT2 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
H3F3CQ6NXT2 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
H3F3CQ6NXT2 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
H3F3CQ6NXT2 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
H3F3CQ6NXT2 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
H3F3CQ6NXT2 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
H3F3CQ6NXT2 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
H3F3CQ6NXT2 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC13.15□□□□□ -0.3
H3F3CQ6NXT2 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
H3F3CQ6NXT2 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC13.15□□□□□ -0.3
H3F3CQ6NXT2 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
H3F3CQ6NXT2 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
H3F3CQ6NXT2 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
H3F3CQ6NXT2 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
H3F3CQ6NXT2 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC13.15□□□□□ -0.3
H3F3CQ6NXT2 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
H3F3CQ6NXT2 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.31
H3F3CQ6NXT2 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
H3F3CQ6NXT2 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.15□□□□□ -0.31
H3F3CQ6NXT2 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
H3F3CQ6NXT2 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
H3F3CQ6NXT2 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.31
H3F3CQ6NXT2 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.31
H3F3CQ6NXT2 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
H3F3CQ6NXT2 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
H3F3CQ6NXT2 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
H3F3CQ6NXT2 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
H3F3CQ6NXT2 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
H3F3CQ6NXT2 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC13.14□□□□□ -0.31
H3F3CQ6NXT2 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
H3F3CQ6NXT2 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
H3F3CQ6NXT2 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
H3F3CQ6NXT2 APP-205ENST00000358918 2366 ntTSL 5 BASIC13.14□□□□□ -0.31
H3F3CQ6NXT2 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
H3F3CQ6NXT2 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
H3F3CQ6NXT2 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC13.14□□□□□ -0.31
H3F3CQ6NXT2 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
H3F3CQ6NXT2 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
H3F3CQ6NXT2 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
H3F3CQ6NXT2 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
H3F3CQ6NXT2 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC13.14□□□□□ -0.31
H3F3CQ6NXT2 BX679664.3-201ENST00000414070 555 ntBASIC13.14□□□□□ -0.31
H3F3CQ6NXT2 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC13.14□□□□□ -0.31
H3F3CQ6NXT2 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC13.14□□□□□ -0.31
H3F3CQ6NXT2 PPP1R2P4-201ENST00000424051 595 ntBASIC13.14□□□□□ -0.31
H3F3CQ6NXT2 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
H3F3CQ6NXT2 AL512306.1-201ENST00000432698 848 ntBASIC13.14□□□□□ -0.31
H3F3CQ6NXT2 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
H3F3CQ6NXT2 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC13.14□□□□□ -0.31
H3F3CQ6NXT2 AC018638.5-201ENST00000450885 754 ntBASIC13.14□□□□□ -0.31
H3F3CQ6NXT2 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC13.14□□□□□ -0.31
H3F3CQ6NXT2 AC113935.1-201ENST00000471722 555 ntBASIC13.14□□□□□ -0.31
H3F3CQ6NXT2 AC104784.1-201ENST00000473096 294 ntBASIC13.14□□□□□ -0.31
H3F3CQ6NXT2 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC13.14□□□□□ -0.31
H3F3CQ6NXT2 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC13.14□□□□□ -0.31
H3F3CQ6NXT2 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
H3F3CQ6NXT2 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
H3F3CQ6NXT2 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC13.14□□□□□ -0.31
H3F3CQ6NXT2 MIR5572-201ENST00000583188 137 ntBASIC13.14□□□□□ -0.31
H3F3CQ6NXT2 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
H3F3CQ6NXT2 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC13.14□□□□□ -0.31
H3F3CQ6NXT2 AC084781.1-201ENST00000613737 656 ntBASIC13.14□□□□□ -0.31
H3F3CQ6NXT2 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
H3F3CQ6NXT2 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC13.14□□□□□ -0.31
H3F3CQ6NXT2 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
H3F3CQ6NXT2 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
H3F3CQ6NXT2 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
H3F3CQ6NXT2 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
H3F3CQ6NXT2 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
H3F3CQ6NXT2 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC13.14□□□□□ -0.31
H3F3CQ6NXT2 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
H3F3CQ6NXT2 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
H3F3CQ6NXT2 LINC01230-201ENST00000625222 3017 ntBASIC13.14□□□□□ -0.31
H3F3CQ6NXT2 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
H3F3CQ6NXT2 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
H3F3CQ6NXT2 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
H3F3CQ6NXT2 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
H3F3CQ6NXT2 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
H3F3CQ6NXT2 CR383656.2-201ENST00000548656 2254 ntBASIC13.14□□□□□ -0.31
H3F3CQ6NXT2 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms