Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RIF1Q5UIP0 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
RIF1Q5UIP0 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RIF1Q5UIP0 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RIF1Q5UIP0 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RIF1Q5UIP0 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC13.49□□□□□ -0.25
RIF1Q5UIP0 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RIF1Q5UIP0 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
RIF1Q5UIP0 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RIF1Q5UIP0 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
RIF1Q5UIP0 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC13.49□□□□□ -0.25
RIF1Q5UIP0 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RIF1Q5UIP0 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC13.49□□□□□ -0.25
RIF1Q5UIP0 STK16-202ENST00000409260 1493 ntTSL 5 BASIC13.49□□□□□ -0.25
RIF1Q5UIP0 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
RIF1Q5UIP0 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RIF1Q5UIP0 CKS2-201ENST00000314355 613 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RIF1Q5UIP0 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RIF1Q5UIP0 RSPH4A-202ENST00000368580 1410 ntTSL 5 BASIC13.49□□□□□ -0.25
RIF1Q5UIP0 INMT-202ENST00000409539 803 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RIF1Q5UIP0 AC090587.1-201ENST00000415809 494 ntTSL 3 BASIC13.49□□□□□ -0.25
RIF1Q5UIP0 AC007383.2-201ENST00000420509 752 ntTSL 2 BASIC13.49□□□□□ -0.25
RIF1Q5UIP0 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC13.49□□□□□ -0.25
RIF1Q5UIP0 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC13.49□□□□□ -0.25
RIF1Q5UIP0 AC078923.1-201ENST00000552856 748 ntTSL 3 BASIC13.49□□□□□ -0.25
RIF1Q5UIP0 GARS-210ENST00000627489 324 ntTSL 4 BASIC13.49□□□□□ -0.25
RIF1Q5UIP0 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC13.49□□□□□ -0.25
RIF1Q5UIP0 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RIF1Q5UIP0 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RIF1Q5UIP0 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RIF1Q5UIP0 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RIF1Q5UIP0 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC13.49□□□□□ -0.25
RIF1Q5UIP0 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.48□□□□□ -0.25
RIF1Q5UIP0 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC13.48□□□□□ -0.25
RIF1Q5UIP0 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
RIF1Q5UIP0 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RIF1Q5UIP0 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
RIF1Q5UIP0 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
RIF1Q5UIP0 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
RIF1Q5UIP0 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC13.48□□□□□ -0.25
RIF1Q5UIP0 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.48□□□□□ -0.25
RIF1Q5UIP0 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC13.48□□□□□ -0.25
RIF1Q5UIP0 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
RIF1Q5UIP0 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RIF1Q5UIP0 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RIF1Q5UIP0 SLC35A2-203ENST00000376515 1044 ntTSL 3 BASIC13.48□□□□□ -0.25
RIF1Q5UIP0 SLC2A11-208ENST00000405847 730 ntTSL 2 BASIC13.48□□□□□ -0.25
RIF1Q5UIP0 MIR1249-201ENST00000408671 66 ntBASIC13.48□□□□□ -0.25
RIF1Q5UIP0 HAND2-AS1-208ENST00000504740 837 ntTSL 3 BASIC13.48□□□□□ -0.25
RIF1Q5UIP0 IGHVII-74-1-201ENST00000517572 241 ntBASIC13.48□□□□□ -0.25
RIF1Q5UIP0 AC109597.2-201ENST00000569407 927 ntTSL 3 BASIC13.48□□□□□ -0.25
RIF1Q5UIP0 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.48□□□□□ -0.25
RIF1Q5UIP0 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RIF1Q5UIP0 AC015813.5-201ENST00000624641 1514 ntBASIC13.48□□□□□ -0.25
RIF1Q5UIP0 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
RIF1Q5UIP0 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
RIF1Q5UIP0 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RIF1Q5UIP0 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
RIF1Q5UIP0 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RIF1Q5UIP0 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RIF1Q5UIP0 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
RIF1Q5UIP0 LINC01658-201ENST00000320372 1578 ntTSL 2 BASIC13.48□□□□□ -0.25
RIF1Q5UIP0 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RIF1Q5UIP0 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RIF1Q5UIP0 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RIF1Q5UIP0 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
RIF1Q5UIP0 IMMP1L-201ENST00000278200 795 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
RIF1Q5UIP0 ABCD3-201ENST00000315713 884 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RIF1Q5UIP0 GAST-201ENST00000329402 470 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RIF1Q5UIP0 NAA10-205ENST00000393712 908 ntTSL 5 BASIC13.48□□□□□ -0.25
RIF1Q5UIP0 RPL3P9-201ENST00000463217 1183 ntBASIC13.48□□□□□ -0.25
RIF1Q5UIP0 IGKV3-11-201ENST00000483158 392 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
RIF1Q5UIP0 TSPAN9-IT1-201ENST00000539784 562 ntTSL 4 BASIC13.48□□□□□ -0.25
RIF1Q5UIP0 BCAR1P1-201ENST00000553953 636 ntBASIC13.48□□□□□ -0.25
RIF1Q5UIP0 IFI27L1-205ENST00000554544 406 ntTSL 3 BASIC13.48□□□□□ -0.25
RIF1Q5UIP0 FXYD3-210ENST00000604621 548 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
RIF1Q5UIP0 Metazoa_SRP.64-201ENST00000611904 268 ntBASIC13.48□□□□□ -0.25
RIF1Q5UIP0 MGST3-214ENST00000627653 1130 ntTSL 5 BASIC13.48□□□□□ -0.25
RIF1Q5UIP0 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
RIF1Q5UIP0 CALU-202ENST00000449187 2438 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RIF1Q5UIP0 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RIF1Q5UIP0 ZSCAN21-201ENST00000292450 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RIF1Q5UIP0 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RIF1Q5UIP0 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RIF1Q5UIP0 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC13.47□□□□□ -0.25
RIF1Q5UIP0 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.47□□□□□ -0.25
RIF1Q5UIP0 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
RIF1Q5UIP0 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC13.47□□□□□ -0.25
RIF1Q5UIP0 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC13.47□□□□□ -0.25
RIF1Q5UIP0 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RIF1Q5UIP0 SH3BGR-202ENST00000380631 780 ntTSL 5 BASIC13.47□□□□□ -0.25
RIF1Q5UIP0 AC064853.1-201ENST00000413096 540 ntTSL 4 BASIC13.47□□□□□ -0.25
RIF1Q5UIP0 PLA2G1B-202ENST00000423423 423 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RIF1Q5UIP0 LINC01664-202ENST00000441544 1175 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RIF1Q5UIP0 RN7SL646P-201ENST00000492969 297 ntBASIC13.47□□□□□ -0.25
RIF1Q5UIP0 AC010442.2-201ENST00000509301 407 ntBASIC13.47□□□□□ -0.25
RIF1Q5UIP0 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
RIF1Q5UIP0 AC091736.1-201ENST00000609370 305 ntBASIC13.47□□□□□ -0.25
RIF1Q5UIP0 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
RIF1Q5UIP0 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms