Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
VARS2Q5ST30 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
VARS2Q5ST30 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0.01
VARS2Q5ST30 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
VARS2Q5ST30 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC15.08■□□□□ 0.01
VARS2Q5ST30 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
VARS2Q5ST30 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
VARS2Q5ST30 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
VARS2Q5ST30 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
VARS2Q5ST30 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC15.08■□□□□ 0
VARS2Q5ST30 AC106881.1-201ENST00000605849 3329 ntBASIC15.08■□□□□ 0
VARS2Q5ST30 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.08■□□□□ 0
VARS2Q5ST30 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
VARS2Q5ST30 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
VARS2Q5ST30 LINC00469-201ENST00000321800 708 ntTSL 1 (best) BASIC15.08■□□□□ 0
VARS2Q5ST30 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
VARS2Q5ST30 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
VARS2Q5ST30 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC15.08■□□□□ 0
VARS2Q5ST30 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC15.08■□□□□ 0
VARS2Q5ST30 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC15.08■□□□□ 0
VARS2Q5ST30 AC092638.2-201ENST00000441105 947 ntBASIC15.08■□□□□ 0
VARS2Q5ST30 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC15.08■□□□□ 0
VARS2Q5ST30 MTND3P3-201ENST00000505004 126 ntBASIC15.08■□□□□ 0
VARS2Q5ST30 CBX3P7-201ENST00000532876 502 ntBASIC15.08■□□□□ 0
VARS2Q5ST30 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
VARS2Q5ST30 KLF17P1-201ENST00000547105 1126 ntBASIC15.08■□□□□ 0
VARS2Q5ST30 NUDT4-205ENST00000548662 765 ntTSL 3 BASIC15.08■□□□□ 0
VARS2Q5ST30 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC15.08■□□□□ 0
VARS2Q5ST30 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC15.08■□□□□ 0
VARS2Q5ST30 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC15.08■□□□□ 0
VARS2Q5ST30 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC15.08■□□□□ 0
VARS2Q5ST30 AL109741.3-201ENST00000561748 592 ntBASIC15.08■□□□□ 0
VARS2Q5ST30 AC007952.4-201ENST00000573866 637 ntBASIC15.08■□□□□ 0
VARS2Q5ST30 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC15.08■□□□□ 0
VARS2Q5ST30 AC126365.2-201ENST00000580630 379 ntBASIC15.08■□□□□ 0
VARS2Q5ST30 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC15.08■□□□□ 0
VARS2Q5ST30 AC007250.1-201ENST00000608934 338 ntBASIC15.08■□□□□ 0
VARS2Q5ST30 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
VARS2Q5ST30 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.08■□□□□ 0
VARS2Q5ST30 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
VARS2Q5ST30 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
VARS2Q5ST30 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
VARS2Q5ST30 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
VARS2Q5ST30 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
VARS2Q5ST30 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
VARS2Q5ST30 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
VARS2Q5ST30 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
VARS2Q5ST30 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
VARS2Q5ST30 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.08■□□□□ 0
VARS2Q5ST30 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.08■□□□□ 0
VARS2Q5ST30 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
VARS2Q5ST30 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC15.08■□□□□ 0
VARS2Q5ST30 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
VARS2Q5ST30 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.08■□□□□ 0
VARS2Q5ST30 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC15.08■□□□□ 0
VARS2Q5ST30 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
VARS2Q5ST30 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.07■□□□□ 0
VARS2Q5ST30 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.07■□□□□ 0
VARS2Q5ST30 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC15.07■□□□□ 0
VARS2Q5ST30 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
VARS2Q5ST30 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
VARS2Q5ST30 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
VARS2Q5ST30 IL9RP3-201ENST00000442856 1674 ntBASIC15.07■□□□□ 0
VARS2Q5ST30 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
VARS2Q5ST30 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
VARS2Q5ST30 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
VARS2Q5ST30 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC15.07■□□□□ 0
VARS2Q5ST30 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
VARS2Q5ST30 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC15.07■□□□□ 0
VARS2Q5ST30 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC15.07■□□□□ 0
VARS2Q5ST30 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC15.07■□□□□ 0
VARS2Q5ST30 AC013469.1-201ENST00000426985 403 ntBASIC15.07■□□□□ 0
VARS2Q5ST30 AC012362.1-201ENST00000434906 739 ntBASIC15.07■□□□□ 0
VARS2Q5ST30 LYPLA2P1-203ENST00000447689 696 ntBASIC15.07■□□□□ 0
VARS2Q5ST30 RGS5-216ENST00000449680 788 ntTSL 3 BASIC15.07■□□□□ 0
VARS2Q5ST30 DPY19L2P5-201ENST00000456300 331 ntBASIC15.07■□□□□ 0
VARS2Q5ST30 KRT18P15-201ENST00000458108 1291 ntBASIC15.07■□□□□ 0
VARS2Q5ST30 IGHV3-37-201ENST00000518544 340 ntBASIC15.07■□□□□ 0
VARS2Q5ST30 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
VARS2Q5ST30 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC15.07■□□□□ 0
VARS2Q5ST30 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC15.07■□□□□ 0
VARS2Q5ST30 RNF146-211ENST00000609447 607 ntTSL 4 BASIC15.07■□□□□ 0
VARS2Q5ST30 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC15.07■□□□□ 0
VARS2Q5ST30 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC15.07■□□□□ 0
VARS2Q5ST30 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC15.07■□□□□ 0
VARS2Q5ST30 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
VARS2Q5ST30 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC15.07■□□□□ 0
VARS2Q5ST30 SHMT1P1-201ENST00000419974 1312 ntBASIC15.07■□□□□ 0
VARS2Q5ST30 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
VARS2Q5ST30 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC15.07■□□□□ 0
VARS2Q5ST30 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
VARS2Q5ST30 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
VARS2Q5ST30 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.07■□□□□ 0
VARS2Q5ST30 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
VARS2Q5ST30 AC090502.4-201ENST00000551714 1386 ntBASIC15.07■□□□□ 0
VARS2Q5ST30 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
VARS2Q5ST30 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
VARS2Q5ST30 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.07■□□□□ 0
VARS2Q5ST30 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
VARS2Q5ST30 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms