RNA–Protein interactions for RNA: ENST00000532876.1

CBX3P7-201, Transcript of chromobox 3 pseudogene 7, humanhuman

BASIC

Gene CBX3P7, Length 502 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P7-201ENST00000532876 AEBP2Q6ZN18 517 aaPredicted RBP35.29■■■■□ 3.24
CBX3P7-201ENST00000532876 CHIC1Q5VXU3 224 aa32.75■■■□□ 2.83
CBX3P7-201ENST00000532876 SENP3Q9H4L4 574 aaPredicted RBP30.07■■■□□ 2.4
CBX3P7-201ENST00000532876 PHF23Q9BUL5 403 aaPredicted RBP29.58■■■□□ 2.33
CBX3P7-201ENST00000532876 FOXD1Q16676 465 aa28.23■■■□□ 2.11
CBX3P7-201ENST00000532876 POTEDQ86YR6 584 aa27.62■■■□□ 2.01
CBX3P7-201ENST00000532876 MSH5O43196 834 aa26.64■■□□□ 1.86
CBX3P7-201ENST00000532876 PIAS4Q8N2W9 510 aaPredicted RBP26.07■■□□□ 1.76
CBX3P7-201ENST00000532876 PPP6R1Q9UPN7 881 aa25.75■■□□□ 1.71
CBX3P7-201ENST00000532876 ADRA2BP18089 450 aa25.56■■□□□ 1.68
CBX3P7-201ENST00000532876 PLPPR3Q6T4P5 718 aa25.51■■□□□ 1.67
CBX3P7-201ENST00000532876 MAPK8IP2Q13387 824 aaPredicted RBP23.77■■□□□ 1.4
CBX3P7-201ENST00000532876 DMRT2Q9Y5R5 561 aa23.76■■□□□ 1.39
CBX3P7-201ENST00000532876 CACNB1Q02641 598 aaPredicted RBP23.38■■□□□ 1.33
CBX3P7-201ENST00000532876 SCAF1Q9H7N4 1312 aaKnown RBP23.21■■□□□ 1.31
CBX3P7-201ENST00000532876 RNF39Q9H2S5 420 aa22.75■■□□□ 1.23
CBX3P7-201ENST00000532876 DCAF8L1A6NGE4 600 aa22.66■■□□□ 1.22
CBX3P7-201ENST00000532876 HOXD11P31277 338 aaPredicted RBP22.57■■□□□ 1.2
CBX3P7-201ENST00000532876 PPP4R3CPQ6ZMV5 832 aa22.29■■□□□ 1.16
CBX3P7-201ENST00000532876 C1QBPQ07021 282 aaKnown RBP22.28■■□□□ 1.16
CBX3P7-201ENST00000532876 RNF216Q9NWF9 866 aaPredicted RBP22.1■■□□□ 1.13
CBX3P7-201ENST00000532876 CNKSR2Q8WXI2 1034 aa22.05■■□□□ 1.12
CBX3P7-201ENST00000532876 DNAJC5BQ9UF47 199 aa21.94■■□□□ 1.1
CBX3P7-201ENST00000532876 POTEHQ6S545 545 aa21.42■■□□□ 1.02
CBX3P7-201ENST00000532876 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.34■■□□□ 1.01
CBX3P7-201ENST00000532876 NCBP3Q53F19 620 aaKnown RBP21.04■□□□□ 0.96
CBX3P7-201ENST00000532876 DSG3P32926 999 aa21■□□□□ 0.95
CBX3P7-201ENST00000532876 U3KPZ7 1027 aaPredicted RBP20.95■□□□□ 0.94
CBX3P7-201ENST00000532876 SPINK5Q9NQ38 1064 aaPredicted RBP20.9■□□□□ 0.94
CBX3P7-201ENST00000532876 NPM3O75607 178 aaKnown RBP20.89■□□□□ 0.93
CBX3P7-201ENST00000532876 CAPN15O75808 1086 aa20.77■□□□□ 0.92
CBX3P7-201ENST00000532876 ABCB7O75027 752 aa20.28■□□□□ 0.84
CBX3P7-201ENST00000532876 SLC4A2P04920 1241 aa20.25■□□□□ 0.83
CBX3P7-201ENST00000532876 TRHP20396 242 aaPredicted RBP20.24■□□□□ 0.83
CBX3P7-201ENST00000532876 ZNF219Q9P2Y4 722 aaPredicted RBP20.17■□□□□ 0.82
CBX3P7-201ENST00000532876 APLP2Q06481 763 aa20.04■□□□□ 0.8
CBX3P7-201ENST00000532876 RBM42Q9BTD8 480 aaKnown RBP19.92■□□□□ 0.78
CBX3P7-201ENST00000532876 CHRDL2Q6WN34 429 aa19.91■□□□□ 0.78
CBX3P7-201ENST00000532876 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.85■□□□□ 0.77
CBX3P7-201ENST00000532876 HNRNPUL2Q1KMD3 747 aaKnown RBP19.85■□□□□ 0.77
CBX3P7-201ENST00000532876 SAMD1Q6SPF0 538 aaPredicted RBP19.74■□□□□ 0.75
CBX3P7-201ENST00000532876 KCNA4P22459 653 aa19.71■□□□□ 0.75
CBX3P7-201ENST00000532876 SP7Q8TDD2 431 aaPredicted RBP19.66■□□□□ 0.74
CBX3P7-201ENST00000532876 POLA2Q14181 598 aa19.53■□□□□ 0.72
CBX3P7-201ENST00000532876 AKT1S1Q96B36 256 aa19.33■□□□□ 0.68
CBX3P7-201ENST00000532876 PIP4P2Q8N4L2 257 aa19.29■□□□□ 0.68
CBX3P7-201ENST00000532876 MYCNP04198 464 aaPredicted RBP19.28■□□□□ 0.68
CBX3P7-201ENST00000532876 REM2Q8IYK8 340 aaPredicted RBP19.19■□□□□ 0.66
CBX3P7-201ENST00000532876 HAX1O00165 279 aa19.06■□□□□ 0.64
CBX3P7-201ENST00000532876 FXR2P51116 673 aaKnown RBP eCLIP19.04■□□□□ 0.64
CBX3P7-201ENST00000532876 ATF5Q9Y2D1 282 aaPredicted RBP19.04■□□□□ 0.64
CBX3P7-201ENST00000532876 PITPNM1O00562 1244 aa19.02■□□□□ 0.64
CBX3P7-201ENST00000532876 OSCARQ8IYS5 282 aa18.99■□□□□ 0.63
CBX3P7-201ENST00000532876 ZBTB12Q9Y330 459 aaPredicted RBP18.99■□□□□ 0.63
CBX3P7-201ENST00000532876 EVX2Q03828 476 aa18.95■□□□□ 0.62
CBX3P7-201ENST00000532876 FOXD4L1Q9NU39 408 aa18.61■□□□□ 0.57
CBX3P7-201ENST00000532876 C19orf67A6NJJ6 358 aa18.47■□□□□ 0.55
CBX3P7-201ENST00000532876 PRKAR2AP13861 404 aaKnown RBP18.45■□□□□ 0.54
CBX3P7-201ENST00000532876 SPDYE2BA6NHP3 402 aa18.4■□□□□ 0.54
CBX3P7-201ENST00000532876 SPDYE6P0CI01 402 aa18.4■□□□□ 0.54
CBX3P7-201ENST00000532876 SPDYE2Q495Y8 402 aa18.4■□□□□ 0.54
CBX3P7-201ENST00000532876 LHX8Q68G74 356 aa18.4■□□□□ 0.54
CBX3P7-201ENST00000532876 GABBR2O75899 941 aa18.39■□□□□ 0.53
CBX3P7-201ENST00000532876 SLC4A1APQ9BWU0 796 aaKnown RBP18.34■□□□□ 0.53
CBX3P7-201ENST00000532876 SPDYE1Q8NFV5 336 aaPredicted RBP18.25■□□□□ 0.51
CBX3P7-201ENST00000532876 CLEC11AQ9Y240 323 aa18.24■□□□□ 0.51
CBX3P7-201ENST00000532876 ZBTB22O15209 634 aa18.19■□□□□ 0.5
CBX3P7-201ENST00000532876 SSUH2Q9Y2M2 353 aa18.14■□□□□ 0.49
CBX3P7-201ENST00000532876 FBLN2P98095 1184 aa18.13■□□□□ 0.49
CBX3P7-201ENST00000532876 ATXN8OSP0DMR3 200 aa18.12■□□□□ 0.49
CBX3P7-201ENST00000532876 MKRN4PQ13434 485 aaPredicted RBP18.11■□□□□ 0.49
CBX3P7-201ENST00000532876 CHADLQ6NUI6 762 aa18.1■□□□□ 0.49
CBX3P7-201ENST00000532876 POTEIP0CG38 1075 aa18.09■□□□□ 0.49
CBX3P7-201ENST00000532876 ZNF692Q9BU19 519 aaPredicted RBP17.98■□□□□ 0.47
CBX3P7-201ENST00000532876 PLSCR2Q9NRY7 297 aa17.88■□□□□ 0.45
CBX3P7-201ENST00000532876 PRR29P0C7W0 189 aa17.82■□□□□ 0.44
CBX3P7-201ENST00000532876 CD44P16070 742 aaKnown RBP17.81■□□□□ 0.44
CBX3P7-201ENST00000532876 PABPN1Q86U42 306 aaKnown RBP eCLIP17.74■□□□□ 0.43
CBX3P7-201ENST00000532876 FARP1Q9Y4F1 1045 aaPredicted RBP17.72■□□□□ 0.43
CBX3P7-201ENST00000532876 CLCN6P51797 869 aa17.68■□□□□ 0.42
CBX3P7-201ENST00000532876 DCBLD2Q96PD2 775 aa17.58■□□□□ 0.4
CBX3P7-201ENST00000532876 ZNF579Q8NAF0 562 aaKnown RBP17.56■□□□□ 0.4
CBX3P7-201ENST00000532876 OTUD5Q96G74 571 aa17.54■□□□□ 0.4
CBX3P7-201ENST00000532876 POTEB2H3BUK9 544 aa17.48■□□□□ 0.39
CBX3P7-201ENST00000532876 GALR2O43603 387 aaPredicted RBP17.41■□□□□ 0.38
CBX3P7-201ENST00000532876 ZRANB1Q9UGI0 708 aa17.4■□□□□ 0.38
CBX3P7-201ENST00000532876 POTEMA6NI47 508 aa17.38■□□□□ 0.37
CBX3P7-201ENST00000532876 CREBZFQ9NS37 354 aa17.31■□□□□ 0.36
CBX3P7-201ENST00000532876 POTEGQ6S5H5 508 aa17.3■□□□□ 0.36
CBX3P7-201ENST00000532876 PELP1Q8IZL8 1130 aaKnown RBP17.21■□□□□ 0.35
CBX3P7-201ENST00000532876 PHF12Q96QT6 1004 aa17.16■□□□□ 0.34
CBX3P7-201ENST00000532876 POTEJP0CG39 1038 aa17.11■□□□□ 0.33
CBX3P7-201ENST00000532876 LCE2DQ5TA82 110 aaPredicted RBP17.08■□□□□ 0.32
CBX3P7-201ENST00000532876 PCDH10Q9P2E7 1040 aa17.07■□□□□ 0.32
CBX3P7-201ENST00000532876 ASTLQ6HA08 431 aaPredicted RBP17■□□□□ 0.31
CBX3P7-201ENST00000532876 STAG3Q9UJ98 1225 aa16.98■□□□□ 0.31
CBX3P7-201ENST00000532876 METRNQ9UJH8 293 aa16.98■□□□□ 0.31
CBX3P7-201ENST00000532876 PAK3O75914 559 aaPredicted RBP16.96■□□□□ 0.31
CBX3P7-201ENST00000532876 MNX1P50219 401 aaPredicted RBP16.95■□□□□ 0.3
CBX3P7-201ENST00000532876 ATMINO43313 823 aaPredicted RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms