Protein–RNA interactions for Protein: P48382

RFX5, DNA-binding protein RFX5, humanhuman

Predicted RBP Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX5P48382 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFX5P48382 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
RFX5P48382 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RFX5P48382 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFX5P48382 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC17.14■□□□□ 0.33
RFX5P48382 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
RFX5P48382 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFX5P48382 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFX5P48382 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.14■□□□□ 0.33
RFX5P48382 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
RFX5P48382 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFX5P48382 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFX5P48382 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
RFX5P48382 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFX5P48382 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC17.14■□□□□ 0.33
RFX5P48382 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC17.14■□□□□ 0.33
RFX5P48382 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC17.14■□□□□ 0.33
RFX5P48382 RN7SL23P-201ENST00000484055 275 ntBASIC17.14■□□□□ 0.33
RFX5P48382 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC17.14■□□□□ 0.33
RFX5P48382 RPS23-207ENST00000511844 530 ntTSL 2 BASIC17.14■□□□□ 0.33
RFX5P48382 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC17.14■□□□□ 0.33
RFX5P48382 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC17.14■□□□□ 0.33
RFX5P48382 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC17.14■□□□□ 0.33
RFX5P48382 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC17.14■□□□□ 0.33
RFX5P48382 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC17.14■□□□□ 0.33
RFX5P48382 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFX5P48382 CHMP5-202ENST00000419016 1957 ntTSL 2 BASIC17.14■□□□□ 0.33
RFX5P48382 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC17.14■□□□□ 0.33
RFX5P48382 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RFX5P48382 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC17.14■□□□□ 0.33
RFX5P48382 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFX5P48382 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFX5P48382 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RFX5P48382 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
RFX5P48382 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFX5P48382 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFX5P48382 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC17.14■□□□□ 0.33
RFX5P48382 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
RFX5P48382 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
RFX5P48382 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RFX5P48382 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
RFX5P48382 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
RFX5P48382 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC17.14■□□□□ 0.33
RFX5P48382 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFX5P48382 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RFX5P48382 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFX5P48382 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFX5P48382 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFX5P48382 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC17.13■□□□□ 0.33
RFX5P48382 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFX5P48382 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
RFX5P48382 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RFX5P48382 FAM90A12P-201ENST00000519497 2375 ntBASIC17.13■□□□□ 0.33
RFX5P48382 FAM90A24P-201ENST00000520792 2369 ntBASIC17.13■□□□□ 0.33
RFX5P48382 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFX5P48382 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFX5P48382 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RFX5P48382 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC17.13■□□□□ 0.33
RFX5P48382 CROT-203ENST00000419147 2959 ntTSL 2 BASIC17.13■□□□□ 0.33
RFX5P48382 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
RFX5P48382 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC17.13■□□□□ 0.33
RFX5P48382 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC17.13■□□□□ 0.33
RFX5P48382 KRT18P62-201ENST00000446618 1287 ntBASIC17.13■□□□□ 0.33
RFX5P48382 BUD31-205ENST00000456893 512 ntTSL 5 BASIC17.13■□□□□ 0.33
RFX5P48382 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC17.13■□□□□ 0.33
RFX5P48382 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC17.13■□□□□ 0.33
RFX5P48382 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RFX5P48382 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
RFX5P48382 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC17.13■□□□□ 0.33
RFX5P48382 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
RFX5P48382 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
RFX5P48382 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFX5P48382 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RFX5P48382 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFX5P48382 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RFX5P48382 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC17.13■□□□□ 0.33
RFX5P48382 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFX5P48382 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC17.13■□□□□ 0.33
RFX5P48382 GRK6P1-201ENST00000400595 1711 ntBASIC17.13■□□□□ 0.33
RFX5P48382 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RFX5P48382 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
RFX5P48382 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.13■□□□□ 0.33
RFX5P48382 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
RFX5P48382 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFX5P48382 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RFX5P48382 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC17.12■□□□□ 0.33
RFX5P48382 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFX5P48382 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC17.12■□□□□ 0.33
RFX5P48382 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFX5P48382 AC021305.1-201ENST00000520656 1514 ntBASIC17.12■□□□□ 0.33
RFX5P48382 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFX5P48382 AC020763.3-201ENST00000625095 2904 ntBASIC17.12■□□□□ 0.33
RFX5P48382 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC17.12■□□□□ 0.33
RFX5P48382 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RFX5P48382 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC17.12■□□□□ 0.33
RFX5P48382 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC17.12■□□□□ 0.33
RFX5P48382 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFX5P48382 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFX5P48382 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFX5P48382 OR7E115P-201ENST00000382617 1024 ntBASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms